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TBX19

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
TBX19
Identifiers
AliasesTBX19, TBS19, TPIT, dJ747L4.1, T-box 19, T-box transcription factor 19
External IDsOMIM:604614;MGI:1891158;HomoloGene:3779;GeneCards:TBX19;OMA:TBX19 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for TBX19
Genomic location for TBX19
Band1q24.2Start168,280,877bp[1]
End168,314,426bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for TBX19
Genomic location for TBX19
Band1 H2.2|1 72.47 cMStart164,965,424bp[2]
End164,988,342bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • anterior pituitary

  • body of uterus

  • testicle

  • ascending aorta

  • granulocyte

  • Descending thoracic aorta

  • right ovary

  • left ovary

  • right lung

  • tibial arteries
Top expressed in
  • zygote

  • secondary oocyte

  • urethra

  • pituitary gland

  • female urethra

  • male urethra

  • gastrula

  • lumbar subsegment of spinal cord

  • primary oocyte

  • embryo
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9095

83993

Ensembl

ENSG00000143178

ENSMUSG00000026572

UniProt

O60806

Q99ME7

RefSeq (mRNA)

NM_005149

NM_032005

RefSeq (protein)

NP_005140

NP_114394

Location (UCSC)Chr 1: 168.28 – 168.31 MbChr 1: 164.97 – 164.99 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

T-box transcription factor TBX19 is aprotein that in humans is encoded by theTBX19gene.[5]

This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, theT-box. T-box genes encodetranscription factors involved in the regulation of developmental processes. This gene is the human ortholog of mouse Tbx19/Tpit gene. Studies in mouse show that Tpit protein is present only in the two pituitary pro-opiomelanocortin (POMC)-expressing lineages, the corticotrophs and melanotrophs.

The Tpit gene is responsible for a neonatal form of acth deficiency and hypocortisolism.[6]

Mutations in the human ortholog were found in patients with isolated deficiency of pituitary POMC-derived ACTH, suggesting an essential role for this gene in differentiation of the pituitary POMC lineage.[7]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000143178Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000026572Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Yi CH, Terrett JA, Li QY, Ellington K, Packham EA, Armstrong-Buisseret L, McClure P, Slingsby T, Brook JD (Mar 1999). "Identification, mapping, and phylogenomic analysis of four new human members of the T-box gene family: EOMES, TBX6, TBX18, and TBX19".Genomics.55 (1):10–20.doi:10.1006/geno.1998.5632.PMID 9888994.
  6. ^ Williams textbook of endocrinology
  7. ^"Entrez Gene: TBX19 T-box 19".

Further reading

[edit]

External links

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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