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Heterocyclic compound

From Wikipedia, the free encyclopedia
(Redirected fromHeterocycle)
Molecule with one or more rings composed of different elements
For other uses of "ring structure", seeRing structure.
For the journal, seeHeterocycles (journal).

Structures and names of common heterocyclic compounds
Pyridine, a heterocyclic compound

Aheterocyclic compound orring structure is acyclic compound that has atoms of at least two differentelements as members of its ring(s).[1]Heterocyclic organic chemistry is the branch oforganic chemistry dealing with the synthesis, properties, and applications oforganic heterocycles.[2]

Examples of heterocyclic compounds include all of thenucleic acids, the majority of drugs, mostbiomass (cellulose and related materials), and many natural and synthetic dyes. More than half of known compounds are heterocycles.[3] 59% of USFDA-approved drugs containnitrogen heterocycles.[4]

Classification

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The study of organic heterocyclic chemistry focuses especially on organic unsaturated derivatives, and the preponderance of work and applications involves unstrained organic 5- and 6-membered rings. Included arepyridine,thiophene,pyrrole, andfuran. Another large class of organic heterocycles refers to those fused tobenzene rings. For example, the fused benzene derivatives of pyridine, thiophene, pyrrole, and furan arequinoline,benzothiophene,indole, andbenzofuran, respectively. The fusion of two benzene rings gives rise to a third large family of organic compounds. Analogs of the previously mentioned heterocycles for this third family of compounds areacridine,dibenzothiophene,carbazole, anddibenzofuran, respectively.

Heterocyclic organic compounds can be usefully classified based on their electronic structure. The saturated organic heterocycles behave like the acyclic derivatives. Thus,piperidine andtetrahydrofuran are conventionalamines andethers, with modified steric profiles. Therefore, the study of organic heterocyclic chemistry focuses on organic unsaturated rings.

Inorganic rings

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Some heterocycles contain no carbon. Examples areborazine (B3N3 ring),hexachlorophosphazenes (P3N3 rings), andtetrasulfur tetranitride S4N4. In comparison with organic heterocycles, which have numerous commercial applications, inorganic ring systems are mainly of theoretical interest.IUPAC recommends theHantzsch-Widman nomenclature for naming heterocyclic compounds.[5]

Notes on lists

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  • "Heteroatoms" are atoms in the ring other thancarbon atoms.
  • Names in italics are retained byIUPAC and do not follow theHantzsch-Widman nomenclature
  • Some of the names refer to classes of compounds rather than individual compounds.
  • Also no attempt is made to listisomers.

3-membered rings

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Although subject toring strain, 3-membered heterocyclic rings are well characterized.[6]

Three-membered rings with one heteroatom
HeteroatomSaturatedUnsaturated
BoronBoriraneBorirene
NitrogenAziridineAzirine
OxygenOxirane
(ethylene oxide,epoxides)
Oxirene
PhosphorusPhosphiranePhosphirene
SulfurThiirane
(ethylene sulfide,episulfides)
Thiirene
Three-membered rings with two heteroatoms
HeteroatomsSaturatedUnsaturated
2 × NitrogenDiaziridineDiazirine
Nitrogen + OxygenOxaziridineOxazirine
Nitrogen + SulfurThiaziridineThiazirine
2 × OxygenDioxirane (highly unstable)
2 × SulfurDithiirane (highly unstable)

4-membered rings

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Four-membered rings with one heteroatom
HeteroatomSaturatedUnsaturated
BoronBoretaneBorete
NitrogenAzetidineAzete
OxygenOxetaneOxete
PhosphorusPhosphetanePhosphete
SulfurThietaneThiete
Four-membered rings with two heteroatoms
HeteroatomsSaturatedUnsaturated
2 × NitrogenDiazetidineDiazete
2 × OxygenDioxetaneDioxete
2 × SulfurDithietaneDithiete

5-membered rings

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The 5-membered ring compounds containingtwo heteroatoms, at least one of which is nitrogen, are collectively called theazoles.Thiazoles andisothiazoles contain a sulfur and a nitrogen atom in the ring.Dithioles have two sulfur atoms.

A large group of 5-membered ring compounds withthree or more heteroatoms also exists. One example is the class ofdithiazoles, which contain two sulfur atoms and one nitrogen atom.

Five-membered rings with one heteroatom
HeteroatomSaturatedUnsaturated
AntimonyStibolaneStibole
ArsenicArsolaneArsole
BismuthBismolaneBismole
BoronBorolaneBorole
GermaniumGermolaneGermole
NitrogenPyrrolidine
(Azolidine not used)
Pyrrole
(Azole not used)
Pyrroline (partially unsaturated)
OxygenOxolaneFuran
(Oxole not used)
PhosphorusPhospholanePhosphole
SeleniumSelenolaneSelenophene
SiliconSilolaneSilole
SulfurThiolaneThiophene
(Thiole not used)
TelluriumTellurolaneTellurophene
TinStannolaneStannole
Five-membered rings with two heteroatoms
HeteroatomsSaturatedUnsaturated (and partially unsaturated)
2 × NitrogenPyrazolidine
Imidazolidine
Pyrazole (Pyrazoline)
Imidazole (Imidazoline)
Nitrogen + OxygenOxazolidine
Isoxazolidine
Oxazole (Oxazoline)
Isoxazole (Isoxazoline)
Nitrogen + SulfurThiazolidine
Isothiazolidine
Thiazole (Thiazoline)
Isothiazole (Isothiazoline)
Oxygen + SulfurOxathiolane
Isoxathiolane
Oxathiole
Isoxathiole
2 × OxygenDioxolaneDioxole
2 × SulfurDithiolaneDithiole
Five-membered rings with three heteroatoms
HeteroatomsSaturatedUnsaturated
3 × NitrogenTriazole
2 Nitrogen + OxygenOxadiazole
2 Nitrogen + SulfurThiadiazole
Nitrogen + 2 OxygenDioxazole
Nitrogen + 2 SulfurDithiazole
Five-membered rings with four heteroatoms
HeteroatomsSaturatedUnsaturated
4 × NitrogenTetrazole
3 Nitrogen + OxygenOxatriazole
3 Nitrogen + SulfurThiatriazole
Five-membered rings with five heteroatoms
HeteroatomsSaturatedUnsaturated
5 × NitrogenPentazole
4 Nitrogen + OxygenOxatetrazole
4 Nitrogen + SulfurThiatetrazole

6-membered rings

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The 6-membered ring compounds containingtwo heteroatoms, at least one of which is nitrogen, are collectively called theazines.Thiazines contain a sulfur and a nitrogen atom in the ring.Dithiines have two sulfur atoms.

Six-membered rings with one heteroatom
HeteroatomSaturatedUnsaturatedIons
AntimonyStibinaneStibinineStibatabenzene cation
ArsenicArsinaneArsinineArsatabenzene cation
BismuthBisminaneBismineBismatabenzene cation
BoronBorinaneBorinineBoratabenzene anion
GermaniumGerminaneGermine
NitrogenPiperidine
(Azinane not used)
Pyridine
(Azine not used)
Pyridinium cation
OxygenOxanePyran
(Oxine not used)
Pyrylium cation
PhosphorusPhosphinanePhosphininePhosphininium cation[7]
SeleniumSelenaneSelenopyranSelenopyrylium cation
SiliconSilinaneSiline
SulfurThianeThiopyran
(Thiine not used)
Thiopyrylium cation
TelluriumTelluraneTelluropyranTelluropyrylium cation
TinStanninaneStannine
Six-membered rings with two heteroatoms
HeteroatomsSaturatedUnsaturated
2 × NitrogenPiperazinePyrazine
Pyrimidine
Pyridazine
Nitrogen + OxygenMorpholineOxazine
Nitrogen + SulfurThiomorpholineThiazine
Oxygen + SulfurOxathianeOxathiin
2 × OxygenDioxaneDioxin
2 × SulfurDithianeDithiin
Six-membered rings with three heteroatoms
HeteroatomsSaturatedUnsaturated
3 × NitrogenTriazinaneTriazine
3 × OxygenTrioxaneTrioxin
3 × SulfurTrithianeTrithiin
Six-membered rings with four heteroatoms
HeteroatomsSaturatedUnsaturated
4 × NitrogenTetrazine
2 Nitrogen + 2 BoronCarborazine

Six-membered rings with five heteroatoms
Thehypothetical chemical compound with five nitrogen heteroatoms would bepentazine.

Six-membered rings with six heteroatoms
Thehypothetical chemical compound with six nitrogen heteroatoms would behexazine.Borazine is a six-membered ring with three nitrogen heteroatoms and three boron heteroatoms.

7-membered rings

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In a 7-membered ring, the heteroatom must be able to provide an empty π-orbital (e.g. boron) for "normal" aromatic stabilization to be available; otherwise,homoaromaticity may be possible.

Seven-membered rings with one heteroatom
HeteroatomSaturatedUnsaturated
BoronBorepaneBorepine
NitrogenAzepaneAzepine
OxygenOxepaneOxepine
PhosphorusPhosphepanePhosphepine
SulfurThiepaneThiepine
Seven-membered rings with two heteroatoms
HeteroatomsSaturatedUnsaturated
2 × NitrogenDiazepaneDiazepine
Nitrogen + OxygenOxazepaneOxazepine
Nitrogen + SulfurThiazepaneThiazepine

8-membered rings

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HeteroatomSaturatedUnsaturated
NitrogenAzocaneAzocine
OxygenOxocaneOxocine
SulfurThiocaneThiocine

Borazocine is an eight-membered ring with four nitrogen heteroatoms and four boron heteroatoms.

9-membered rings

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HeteroatomSaturatedUnsaturated
NitrogenAzonaneAzonine
OxygenOxonaneOxonine
SulfurThionaneThionine

Images of rings with one heteroatom

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SaturatedUnsaturated
HeteroatomNitrogenOxygenSulfurNitrogenOxygenSulfur
3-atom ringAziridineOxiraneThiiraneAzirineOxireneThiirene
Structure of aziridineStructure of oxiraneStructure of thiiraneStructure of azirineStructure of oxireneStructure of thiirene
4-atom ringAzetidineOxetaneThietaneAzeteOxeteThiete
Structure of acetidineStructure of oxetaneStructure of thietaneStructure of azeteStructure of oxeteStructure of thiete
5-atom ringPyrrolidineOxolaneThiolanePyrroleFuranThiophene
Structure of pyrrolidineStructure of oxolaneStructure of thiolaneStructure of pyrroleStructure of furanStructure of thiophene
6-atom ringPiperidineOxaneThianePyridinePyranThiopyran
Structure of piperidineStructure of oxaneStructure of thianeStructure of pyridineStructure of pyranStructure of thiopyran
7-atom ringAzepaneOxepaneThiepaneAzepineOxepineThiepine
Structure of azepaneStructure of oxepaneStructure of thiepaneStructure of azepineStructure of oxepineStructure of thiepine
8-atom ringAzocaneOxocaneThiocaneAzocineOxocineThiocine
Structure of azocaneStructure of oxocaneStructure of thiocaneStructure of azocineStructure of oxocineStructure of thiocine
9-atom ringAzonaneOxonaneThionaneAzonineOxonineThionine
Structure of azonaneStructure of oxonaneStructure of thionaneStructure of azonineStructure of oxonineStructure of thionine

Fused/condensed rings

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Heterocyclic rings systems that are formally derived by fusion with other rings, eithercarbocyclic or heterocyclic, have a variety of common and systematic names. For example, with the benzo-fused unsaturated nitrogen heterocycles, pyrrole providesindole orisoindole depending on the orientation. The pyridine analog isquinoline orisoquinoline, and the class of analogues with two nitrogen atoms is known as thebenzodiazines. For azepine,benzazepine is the preferred name. Likewise, the compounds with two benzene rings fused to the central heterocycle arecarbazole,acridine, and dibenzoazepine.Thienothiophene are the fusion of two thiophene rings.Phosphaphenalenes are a tricyclic phosphorus-containing heterocyclic system derived from the carbocyclephenalene.

History of heterocyclic chemistry

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The history of heterocyclic chemistry began in the 1800s, in step with the development oforganic chemistry. Some noteworthy developments:[8]

  • 1818: Brugnatelli makesalloxan fromuric acid
  • 1832: Dobereiner producesfurfural (a furan) by treatingstarch withsulfuric acid
  • 1834: Runge obtainspyrrole ("fiery oil") by dry distillation of bones
  • 1906: Friedlander synthesizesindigo dye, allowing synthetic chemistry to displace a large agricultural industry
  • 1936:Treibs isolates chlorophyll derivatives from crude oil, explaining the biological origin of petroleum.
  • 1951:Chargaff's rules are described, highlighting the role of heterocyclic compounds (purines andpyrimidines) in the genetic code.

Uses

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Heterocyclic compounds are pervasive in many areas of life sciences and technology.[2] Many drugs are heterocyclic compounds.[9]

See also

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References

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  1. ^IUPAC Gold Bookheterocyclic compounds
  2. ^abThomas L. Gilchrist "Heterocyclic Chemistry" 3rd ed. Addison Wesley: Essex, England,1997. 414 pp.ISBN 0-582-27843-0.
  3. ^Rees, Charles W. (1992). "Polysulfur-Nitrogen Heterocyclic Chemistry".Journal of Heterocyclic Chemistry.29 (3):639–651.doi:10.1002/jhet.5570290306.
  4. ^Edon Vitaku, David T. Smith, Jon T. Njardarson (2014). "Analysis of the Structural Diversity, Substitution Patterns, and Frequency of Nitrogen Heterocycles among U.S. FDA Approved Pharmaceuticals".J. Med. Chem.57 (24):10257–10274.doi:10.1021/jm501100b.PMID 25255204.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  5. ^IUPAC,Compendium of Chemical Terminology, 2nd ed. (the "Gold Book") (1997). Online corrected version: (2006–) "Hantzsch–Widman name".doi:10.1351/goldbook.H02737
  6. ^Smith, Michael B.;March, Jerry (2007),Advanced Organic Chemistry: Reactions, Mechanisms, and Structure (6th ed.), New York: Wiley-Interscience,ISBN 978-0-471-72091-1
  7. ^Fischer, Lukas; Wossidlo, Friedrich; Frost, Daniel; Coles, Nathan T.; Steinhauer, Simon; Riedel, Sebastian; Müller, Christian (6 August 2021) [19th July 2021]."One-step methylation of aromatic phosphorus heterocycles: synthesis and crystallographic characterization of a 1-methyl-phosphininium salt".Chemical Communications (2021,57). Royal Society of Chemistry:9522–9525.doi:10.1039/D1CC03892C. Retrieved7 March 2025.
  8. ^Campaigne, E. (1986). "Adrien Albert and the rationalization of heterocyclic chemistry".Journal of Chemical Education.63 (10): 860.Bibcode:1986JChEd..63..860C.doi:10.1021/ed063p860.
  9. ^"IPEXL.com Multilingual Patent Search, Patent Ranking".www.ipexl.com. Archived fromthe original on 24 September 2015. Retrieved8 September 2010.

External links

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