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G protein

From Wikipedia, the free encyclopedia
Type of proteins
Not to be confused withProtein G.

Phosducin-transducin beta-gamma complex. Beta and gamma subunits of G-protein are shown by blue and red, respectively.
Guanosine diphosphate
Guanosine triphosphate

G proteins, also known asguanine nucleotide-binding proteins, are afamily of proteins that act asmolecular switches inside cells, and are involved in transmitting signals from a variety of stimuli outside acell to its interior. Their activity is regulated by factors that control their ability to bind to and hydrolyzeguanosine triphosphate (GTP) toguanosine diphosphate (GDP). When they are bound to GTP, they are 'on', and, when they are bound to GDP, they are 'off'. G proteins belong to the larger group ofenzymes calledGTPases.

There are two classes of G proteins. The first function asmonomericsmall GTPases (small G-proteins), while the second function asheterotrimeric G proteincomplexes. The latter class of complexes is made up ofalpha (Gα),beta (Gβ) andgamma (Gγ)subunits.[1] In addition, the beta and gamma subunits can form a stabledimeric complex referred to as thebeta-gamma complex.[2]

Heterotrimeric G proteins located within the cell are activated byG protein-coupled receptors (GPCRs) that span thecell membrane.[3]Signaling molecules bind to a domain of the GPCR located outside the cell, and an intracellular GPCR domain then in turn activates a particular G protein. Some active-state GPCRs have also been shown to be "pre-coupled" with G proteins, whereas in other cases a collision coupling mechanism is thought to occur.[4][5][6] The G protein triggers acascade of further signaling events that finally results in a change in cell function. G protein-coupled receptors and G proteins working together transmit signals from manyhormones,neurotransmitters, and other signaling factors.[7] G proteins regulate metabolicenzymes,ion channels,transporter proteins, and other parts of the cell machinery, controllingtranscription,motility,contractility, andsecretion, which in turn regulate diverse systemic functions such asembryonic development, learning and memory, andhomeostasis.[8]

History

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G proteins were discovered in 1980 whenAlfred G. Gilman andMartin Rodbell investigated stimulation of cells byadrenaline. They found that when adrenaline binds to a receptor, the receptor does not stimulate enzymes (inside the cell) directly. Instead, the receptor stimulates a G protein, which then stimulates an enzyme. An example isadenylate cyclase, which produces thesecond messengercyclic AMP.[9] For this discovery, they won the 1994Nobel Prize in Physiology or Medicine.[10]

Nobel prizes have been awarded for many aspects of signaling by G proteins and GPCRs. These includereceptor antagonists,neurotransmitters, neurotransmitterreuptake,G protein-coupled receptors, G proteins,second messengers, the enzymes that trigger proteinphosphorylation in response tocAMP, and consequent metabolic processes such asglycogenolysis.

Prominent examples include (in chronological order of awarding):

Function

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G proteins are importantsignal transducing molecules in cells. "Malfunction of GPCR [G Protein-Coupled Receptor] signaling pathways are involved in many diseases, such asdiabetes, blindness, allergies, depression, cardiovascular defects, and certain forms ofcancer. It is estimated that about 30% of the modern drugs' cellular targets are GPCRs."[15] The human genome encodes roughly 800[16]G protein-coupled receptors, which detect photons of light, hormones, growth factors, drugs, and other endogenousligands. Approximately 150 of the GPCRs found in the human genome still have unknown functions.

Whereas G proteins are activated byG protein-coupled receptors, they are inactivated byRGS proteins (for "Regulator of G protein signalling"). Receptors stimulate GTP binding (turning the G protein on). RGS proteins stimulate GTP hydrolysis (creating GDP, thus turning the G protein off).

Diversity

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Sequence relationship among the 18 human Gα proteins.[17]

All eukaryotes use G proteins for signaling and have evolved a large diversity of G proteins. For instance, humans encode 18 different Gα proteins, 5 Gβ proteins, and 12 Gγ proteins.[17]

Signaling

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G protein can refer to two distinct families of proteins.Heterotrimeric G proteins, sometimes referred to as the "large" G proteins, are activated byG protein-coupled receptors and are made up of alpha (α), beta (β), and gamma (γ)subunits."Small" G proteins (20-25kDa) belong to theRas superfamily ofsmall GTPases. These proteins arehomologous to the alpha (α) subunit found in heterotrimers, but are in fact monomeric, consisting of only a single unit. However, like their larger relatives, they also bind GTP and GDP and are involved insignal transduction.

Heterotrimeric

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Main article:Heterotrimeric G proteins

Different types of heterotrimeric G proteins share a common mechanism. They are activated in response to aconformational change in the GPCR, exchanging GDP for GTP, and dissociating in order to activate other proteins in a particularsignal transduction pathway.[18] The specific mechanisms, however, differ between protein types.

Mechanism

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Activation cycle of G-proteins (pink) by a G-protein-coupled receptor (GPCR, light blue) receiving a ligand (red). Ligand binding to GPCRs (2) induces a conformation change that facilitates the exchange of GDP for GTP on the α subunit of the heterotrimeric complex (3–4). Both GTP-bound Gα in the active form and the released Gβγ dimer can then go on to stimulate a number of downstream effectors (5). When the GTP on Gα is hydrolyzed to GDP (6) the original receptor is restored (1).[19]

Receptor-activated G proteins are bound to the inner surface of thecell membrane. They consist of the Gα and the tightly associated Gβγ subunits. There are four main families of Gα subunits: Gαs (G stimulatory), Gαi (G inhibitory), Gαq/11, and Gα12/13.[20][21] They behave differently in the recognition of the effector molecule, but share a similar mechanism of activation.

Activation

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When aligand activates theG protein-coupled receptor, it induces a conformational change in the receptor that allows the receptor to function as aguanine nucleotide exchange factor (GEF) that exchanges GDP for GTP. The GTP (or GDP) is bound to the Gα subunit in the traditional view of heterotrimeric GPCR activation. This exchange triggers the dissociation of the Gα subunit (which is bound to GTP) from the Gβγ dimer and the receptor as a whole. However, models which suggest molecular rearrangement, reorganization, and pre-complexing of effector molecules are beginning to be accepted.[4][22][23] Both Gα-GTP and Gβγ can then activate differentsignaling cascades (orsecond messenger pathways) and effector proteins, while the receptor is able to activate the next G protein.[24]

Termination

[edit]

The Gα subunit will eventuallyhydrolyze the attached GTP to GDP by its inherentenzymatic activity, allowing it to re-associate with Gβγ and starting a new cycle. A group of proteins calledRegulator of G protein signalling (RGSs), act asGTPase-activating proteins (GAPs), are specific for Gα subunits. These proteins accelerate the hydrolysis of GTP to GDP, thus terminating the transduced signal. In some cases, the effectoritself may possess intrinsic GAP activity, which then can help deactivate the pathway. This is true in the case ofphospholipase C-beta, which possesses GAP activity within itsC-terminal region. This is an alternate form of regulation for the Gα subunit. Such Gα GAPs do not have catalytic residues (specific amino acid sequences) to activate the Gα protein. They work instead by lowering the requiredactivation energy for the reaction to take place.[25]

Specific mechanisms

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Gαs
[edit]

Gαs activates thecAMP-dependent pathway by stimulating the production ofcyclic AMP (cAMP) fromATP. This is accomplished by direct stimulation of the membrane-associated enzymeadenylate cyclase. cAMP can then act as a second messenger that goes on to interact with and activateprotein kinase A (PKA). PKA can phosphorylate a myriad downstream targets.

ThecAMP-dependent pathway is used as a signal transduction pathway for many hormones including:

Gαi
[edit]

Gαi inhibits the production of cAMP from ATP.e.g. somatostatin, prostaglandins

Gαq/11
[edit]

Gαq/11 stimulates the membrane-boundphospholipase C beta, which then cleavesphosphatidylinositol 4,5-bisphosphate (PIP2) into two second messengers,inositol trisphosphate (IP3) anddiacylglycerol (DAG). IP3 induces calcium release from theendoplasmic reticulum. DAG activatesprotein kinase C.The Inositol Phospholipid Dependent Pathway is used as a signal transduction pathway for many hormones including:

Gα12/13
[edit]
  • Gα12/13 are involved in Rho family GTPase signaling (seeRho family of GTPases). This is through the RhoGEF superfamily involving theRhoGEF domain of the proteins' structures). These are involved in control of cell cytoskeleton remodeling, and thus in regulating cell migration.
Gβ, Gγ
[edit]

Small GTPases

[edit]
Main article:Small GTPase

Small GTPases, also known as small G-proteins, bind GTP and GDP likewise, and are involved insignal transduction. These proteins are homologous to the alpha (α) subunit found in heterotrimers, but exist as monomers. They are small (20-kDa to 25-kDa)proteins that bind to guanosine triphosphate (GTP). This family of proteins is homologous to theRas GTPases and is also called the Ras superfamilyGTPases.

Lipidation

[edit]

In order to associate with the inner leaflet of the plasma membrane, many G proteins and small GTPases are lipidated[citation needed], that is, covalently modified with lipid extensions. They may bemyristoylated,palmitoylated orprenylated.

References

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  1. ^Hurowitz EH, Melnyk JM, Chen YJ, Kouros-Mehr H, Simon MI, Shizuya H (April 2000)."Genomic characterization of the human heterotrimeric G protein alpha, beta, and gamma subunit genes".DNA Research.7 (2):111–20.doi:10.1093/dnares/7.2.111.PMID 10819326.
  2. ^Clapham DE, Neer EJ (1997). "G protein beta gamma subunits".Annual Review of Pharmacology and Toxicology.37:167–203.doi:10.1146/annurev.pharmtox.37.1.167.PMID 9131251.
  3. ^"Seven Transmembrane Receptors: Robert Lefkowitz". 9 September 2012. Retrieved11 July 2016.
  4. ^abQin K, Dong C, Wu G, Lambert NA (August 2011)."Inactive-state preassembly of G(q)-coupled receptors and G(q) heterotrimers".Nature Chemical Biology.7 (10):740–7.doi:10.1038/nchembio.642.PMC 3177959.PMID 21873996.
  5. ^Tolkovsky AM, Levitzki A (1978). "Mode of coupling between the beta-adrenergic receptor and adenylate cyclase in turkey erythrocytes".Biochemistry.17 (18):3795–3810.doi:10.1021/bi00611a020.PMID 212105.
  6. ^Boltz HH, Sirbu A, Stelzer N, de Lanerolle P, Winkelmann S, Annibale P (2022)."The Impact of Membrane Protein Diffusion on GPCR Signaling".Cells.11 (10): 1660.doi:10.3390/cells11101660.PMC 9139411.PMID 35626696.
  7. ^Reece J, C N (2002).Biology. San Francisco: Benjamin Cummings.ISBN 0-8053-6624-5.
  8. ^Neves SR, Ram PT, Iyengar R (May 2002). "G protein pathways".Science.296 (5573):1636–9.Bibcode:2002Sci...296.1636N.doi:10.1126/science.1071550.PMID 12040175.S2CID 20136388.
  9. ^abThe Nobel Prize in Physiology or Medicine 1994, Illustrated Lecture.
  10. ^Press Release: The Nobel Assembly at the Karolinska Institute decided to award the Nobel Prize in Physiology or Medicine for 1994 jointly to Alfred G. Gilman and Martin Rodbell for their discovery of "G-proteins and the role of these proteins in signal transduction in cells". 10 October 1994
  11. ^"The Nobel Prize in Physiology or Medicine 1992 Press Release".Nobel Assembly at Karolinska Institutet. Retrieved21 August 2013.
  12. ^Press Release
  13. ^"Press Release: The 2004 Nobel Prize in Physiology or Medicine". Nobelprize.org. Retrieved8 November 2012.
  14. ^Royal Swedish Academy of Sciences (10 October 2012)."The Nobel Prize in Chemistry 2012 Robert J. Lefkowitz, Brian K. Kobilka". Retrieved10 October 2012.
  15. ^Bosch DE, Siderovski DP (March 2013)."G protein signaling in the parasite Entamoeba histolytica".Experimental & Molecular Medicine.45 (1038): e15.doi:10.1038/emm.2013.30.PMC 3641396.PMID 23519208.
  16. ^Baltoumas FA, Theodoropoulou MC, Hamodrakas SJ (June 2013). "Interactions of the α-subunits of heterotrimeric G-proteins with GPCRs, effectors and RGS proteins: a critical review and analysis of interacting surfaces, conformational shifts, structural diversity and electrostatic potentials".Journal of Structural Biology.182 (3):209–18.doi:10.1016/j.jsb.2013.03.004.PMID 23523730.
  17. ^abSyrovatkina V, Alegre KO, Dey R, Huang XY (September 2016)."Regulation, Signaling, and Physiological Functions of G-Proteins".Journal of Molecular Biology.428 (19):3850–68.doi:10.1016/j.jmb.2016.08.002.PMC 5023507.PMID 27515397.
  18. ^Lim, Wendell (2015).Cell signaling : principles and mechanisms. Bruce Mayer, T. Pawson. New York.ISBN 978-0-8153-4244-1.OCLC 868641565.{{cite book}}: CS1 maint: location missing publisher (link)
  19. ^Stewart, Adele; Fisher, Rory A. (2015).Progress in Molecular Biology and Translational Science. Vol. 133. Elsevier. pp. 1–11.doi:10.1016/bs.pmbts.2015.03.002.ISBN 9780128029381.PMID 26123299.
  20. ^Syrovatkina, Viktoriya; Alegre, Kamela O.; Dey, Raja; Huang, Xin-Yun (25 September 2016)."Regulation, Signaling, and Physiological Functions of G-Proteins".Journal of Molecular Biology.428 (19):3850–3868.doi:10.1016/j.jmb.2016.08.002.ISSN 0022-2836.PMC 5023507.PMID 27515397.
  21. ^"InterPro".www.ebi.ac.uk. Retrieved25 May 2023.
  22. ^Digby GJ, Lober RM, Sethi PR, Lambert NA (November 2006)."Some G protein heterotrimers physically dissociate in living cells".Proceedings of the National Academy of Sciences of the United States of America.103 (47):17789–94.Bibcode:2006PNAS..10317789D.doi:10.1073/pnas.0607116103.PMC 1693825.PMID 17095603.
  23. ^Khafizov K, Lattanzi G, Carloni P (June 2009). "G protein inactive and active forms investigated by simulation methods".Proteins.75 (4):919–30.doi:10.1002/prot.22303.PMID 19089952.S2CID 23909821.
  24. ^Yuen JW, Poon LS, Chan AS, Yu FW, Lo RK, Wong YH (June 2010). "Activation of STAT3 by specific Galpha subunits and multiple Gbetagamma dimers".The International Journal of Biochemistry & Cell Biology.42 (6):1052–9.doi:10.1016/j.biocel.2010.03.017.PMID 20348012.
  25. ^Sprang SR, Chen Z, Du X (2007). "Structural Basis of Effector Regulation and Signal Termination in Heterotrimeric Gα Proteins".Structural basis of effector regulation and signal termination in heterotrimeric Galpha proteins. Advances in Protein Chemistry. Vol. 74. pp. 1–65.doi:10.1016/S0065-3233(07)74001-9.ISBN 978-0-12-034288-4.PMID 17854654.
  26. ^Cole LA (August 2010)."Biological functions of hCG and hCG-related molecules".Reproductive Biology and Endocrinology.8 (1): 102.doi:10.1186/1477-7827-8-102.PMC 2936313.PMID 20735820.

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