Inbiology,adaptation has three related meanings. Firstly, it is the dynamicevolutionary process ofnatural selection that fitsorganisms to their environment, enhancing theirevolutionary fitness. Secondly, it is a state reached by the population during that process. Thirdly, it is aphenotypic trait oradaptive trait, with a functional role in each individualorganism, that is maintained and has evolved through natural selection.
Historically, adaptation has been described from the time of the ancient Greek philosophers such asEmpedocles andAristotle. In 18th and 19th-centurynatural theology, adaptation was taken as evidence for the existence of a deity.Charles Darwin andAlfred Russel Wallace proposed instead that it was explained by natural selection.
Adaptation is related tobiological fitness, which governs the rate of evolution as measured by changes inallele frequencies. Often, two or more species co-adapt andco-evolve as they develop adaptations that interlock with those of the other species, such as withflowering plants andpollinating insects. Inmimicry, species evolve to resemble other species; inmimicry this is a mutually beneficial co-evolution as each of a group of strongly defended species (such as wasps able to sting) come to advertise their defences in the same way. Features evolved for one purpose may beco-opted for a different one, as when the insulatingfeathers of dinosaurs were co-opted forbird flight.
Adaptation is a major topic in thephilosophy of biology, as it concerns function and purpose (teleology). Some biologists try to avoid terms which imply purpose in adaptation, not least because they suggest a deity's intentions, but others note that adaptation is necessarily purposeful.
Adaptation is an observable fact of life accepted by philosophers and natural historians from ancient times, independently of their views onevolution, but their explanations differed.Empedocles did not believe that adaptation required afinal cause (a purpose), but thought that it "came about naturally, since such things survived."Aristotle did believe in final causes, but assumed thatspecies were fixed.[1]
Innatural theology, adaptation was interpreted as the work of a deity and as evidence for the existence of God.[2]William Paley believed that organisms were perfectly adapted to the lives they led, an argument that shadowedGottfried Wilhelm Leibniz, who had argued that God had brought about "the best of all possible worlds."Voltaire's satireDr. Pangloss[3] is a parody of this optimistic idea, andDavid Hume also argued against design.[4]Charles Darwin broke with the tradition by emphasising the flaws and limitations which occurred in the animal and plant worlds.[5]
Jean-Baptiste Lamarck proposed a tendency for organisms to become more complex, moving up a ladder of progress, plus "the influence of circumstances", usually expressed asuse and disuse.[6] This second, subsidiary element of his theory is what is now calledLamarckism, a proto-evolutionary hypothesis of theinheritance of acquired characteristics, intended to explain adaptations by natural means.[7]
Other natural historians, such asBuffon, accepted adaptation, and some also accepted evolution, without voicing their opinions as to the mechanism. This illustrates the real merit of Darwin andAlfred Russel Wallace, and secondary figures such asHenry Walter Bates, for putting forward a mechanism whose significance had only been glimpsed previously. A century later, experimental field studies and breeding experiments by people such asE. B. Ford andTheodosius Dobzhansky producedevidence that natural selection was not only the 'engine' behind adaptation, but was a much stronger force than had previously been thought.[8][9][10]
Adaptation is primarily a process rather than a physical form or part of a body.[12] An internalparasite (such as aliver fluke) can illustrate the distinction: such a parasite may have a very simple bodily structure, but nevertheless the organism is highly adapted to its specific environment. From this we see that adaptation is not just a matter of visible traits: in such parasites critical adaptations take place in thelife cycle, which is often quite complex.[13] However, as a practical term, "adaptation" often refers to aproduct: those features of aspecies which result from the process. Many aspects of an animal or plant can be correctly called adaptations, though there are always some features whose function remains in doubt. By using the termadaptation for the evolutionaryprocess, andadaptive trait for the bodily part or function (the product), one may distinguish the two different senses of the word.[14][15][16][17]
Adaptation is one of the two main processes that explain the observed diversity of species, such as the different species ofDarwin's finches. The other process isspeciation, in which new species arise, typically throughreproductive isolation.[18][19] An example widely used today to study the interplay of adaptation and speciation is the evolution ofcichlid fish in African lakes, where the question of reproductive isolation is complex.[20][21]
Adaptation is not always a simple matter where the ideal phenotype evolves for a given environment. An organism must be viable at all stages of its development and at all stages of its evolution. This placesconstraints on the evolution of development, behaviour, and structure of organisms. The main constraint, over which there has been much debate, is the requirement that eachgenetic and phenotypic change during evolution should be relatively small, because developmental systems are so complex and interlinked. However, it is not clear what "relatively small" should mean, for examplepolyploidy in plants is a reasonably common large genetic change.[22] The origin ofeukaryoticendosymbiosis is a more dramatic example.[23]
The following definitions are given by the evolutionary biologistTheodosius Dobzhansky:
1.Adaptation is the evolutionary process whereby an organism becomes better able to live in itshabitat or habitats.[25][26][27]
2.Adaptedness is the state of being adapted: the degree to which an organism is able to live and reproduce in a given set of habitats.[28]
3. Anadaptive trait is an aspect of the developmental pattern of the organism which enables or enhances the probability of that organism surviving and reproducing.[29]
The common kestrel has adapted successfully to urban areas
Adaptation differs from flexibility,acclimatization, and learning, all of which are changes during life which are not inherited. Flexibility deals with the relative capacity of an organism to maintain itself in different habitats: its degree ofspecialization. Acclimatization describes automatic physiological adjustments during life;[30] learning means alteration in behavioural performance during life.[31]
Flexibility stems fromphenotypic plasticity, the ability of an organism with a givengenotype (genetic type) to change itsphenotype (observable characteristics) in response to changes in itshabitat, or to move to a different habitat.[32][33] The degree of flexibility is inherited, and varies between individuals. A highly specialized animal or plant lives only in a well-defined habitat, eats a specific type of food, and cannot survive if its needs are not met. Manyherbivores are like this; extreme examples arekoalas which depend onEucalyptus, andgiant pandas which requirebamboo. A generalist, on the other hand, eats a range of food, and can survive in many different conditions. Examples are humans, rats, crabs and many carnivores. Thetendency to behave in a specialized or exploratory manner is inherited—it is an adaptation. Rather different is developmental flexibility: "An animal or plant is developmentally flexible if when it is raised in or transferred to new conditions, it changes in structure so that it is better fitted to survive in the new environment," writes theevolutionary biologistJohn Maynard Smith.[34]
If humans move to a higher altitude, respiration and physical exertion become a problem, but after spending time in high altitude conditions they acclimatize to the reduced partial pressure of oxygen, such as by producing morered blood cells. The ability to acclimatize is an adaptation, but the acclimatization itself is not. The reproductive rate declines, but deaths from some tropical diseases also go down. Over a longer period of time, some people are better able to reproduce at high altitudes than others. They contribute more heavily to later generations, and gradually by natural selection the whole population becomes adapted to the new conditions. This has demonstrably occurred, as the observed performance of long-term communities at higher altitude is significantly better than the performance of new arrivals, even when the new arrivals have had time to acclimatize.[35]
There is a relationship between adaptedness and the concept of fitness used inpopulation genetics. Differences in fitness between genotypes predict the rate of evolution by natural selection. Natural selection changes the relative frequencies of alternative phenotypes, insofar as they areheritable.[36] However, a phenotype with high adaptedness may not have high fitness. Dobzhansky mentioned the example of theCalifornian redwood, which is highly adapted, but arelict species in danger ofextinction.[25]Elliott Sober commented that adaptation was a retrospective concept since it implied something about the history of a trait, whereas fitness predicts a trait's future.[37]
1. Relative fitness. The average contribution to the next generation by a genotype or a class of genotypes, relative to the contributions of other genotypes in the population.[38] This is also known asDarwinian fitness,selection coefficient, and other terms.
2. Absolute fitness. The absolute contribution to the next generation by a genotype or a class of genotypes. Also known as theMalthusian parameter when applied to the population as a whole.[36][39]
3. Adaptedness. The extent to which a phenotype fits its local ecological niche. Researchers can sometimes test this through areciprocal transplant.[40]
In this sketch of afitness landscape, a population can evolve by following the arrows to the adaptive peak at point B, and the points A and C are local optima where a population could become trapped.
Sewall Wright proposed that populations occupyadaptive peaks on a fitness landscape. To evolve to another, higher peak, a population would first have to pass through a valley of maladaptive intermediate stages, and might be "trapped" on a peak that is not optimally adapted.[41]
Before Darwin, adaptation was seen as a fixed relationship between an organism and its habitat. It was not appreciated that as theclimate changed, so did the habitat; and as the habitat changed, so did thebiota. Also, habitats are subject to changes in their biota: for example,invasions of species from other areas. The relative numbers of species in a given habitat are always changing. Change is the rule, though much depends on the speed and degree of the change.When the habitat changes, three main things may happen to a resident population: habitat tracking, genetic change or extinction. In fact, all three things may occur in sequence. Of these three effects only genetic change brings about adaptation.When a habitat changes, the resident population typically moves to more suitable places; this is the typical response of flying insects or oceanic organisms, which have wide (though not unlimited) opportunity for movement.[43] This common response is calledhabitat tracking. It is one explanation put forward for the periods of apparent stasis in thefossil record (thepunctuated equilibrium theory).[44]
Withoutmutation, the ultimate source of allgenetic variation, there would be no genetic changes and no subsequent adaptation through evolution by natural selection. Genetic change occurs in a population when mutation increases or decreases in its initial frequency followed by random genetic drift, migration, recombination or natural selection act on this genetic variation.[45] One example is that the first pathways of enzyme-based metabolism at the very origin of life on Earth may have been co-opted components of the already-existingpurine nucleotide metabolism, a metabolic pathway that evolved in an ancientRNA world. The co-option requires new mutations and through natural selection, the population then adapts genetically to its present circumstances.[10] Genetic changes may result in entirely new or gradual change to visible structures, or they may adjust physiological activity in a way that suits the habitat. The varying shapes of the beaks of Darwin's finches, for example, are driven by adaptive mutations in the ALX1 gene.[46] The coat color of different wild mouse species matches their environments, whether black lava or light sand, owing to adaptive mutations in themelanocortin 1 receptor and othermelanin pathway genes.[47][48] Physiological resistance to the heart poisons (cardiac glycosides) thatmonarch butterflies store in their bodies to protect themselves from predators[49][50] are driven by adaptive mutations in the target of the poison, thesodium pump, resulting in target site insensitivity.[51][52][53] These same adaptive mutations and similar changes at the same amino acid sites were found to evolve in a parallel manner in distantly related insects that feed on the same plants, and even in a bird that feeds on monarchs throughconvergent evolution, a hallmark of adaptation.[54][55] Convergence at the gene-level across distantly related species can arise because of evolutionary constraint.[56]
Habitats and biota do frequently change over time and space. Therefore, it follows that the process of adaptation is never fully complete.[57] Over time, it may happen that the environment changes little, and the species comes to fit its surroundings better and better, resulting in stabilizing selection. On the other hand, it may happen that changes in the environment occur suddenly, and then the species becomes less and less well adapted. The only way for it to climb back up that fitness peak is via the introduction of new genetic variation for natural selection to act upon. Seen like this, adaptation is a genetictracking process, which goes on all the time to some extent, but especially when the population cannot or does not move to another, less hostile area. Given enough genetic change, as well as specific demographic conditions, an adaptation may be enough to bring a population back from the brink of extinction in a process calledevolutionary rescue. Adaptation does affect, to some extent, every species in a particularecosystem.[58][59]
Leigh Van Valen thought that even in a stable environment, because of antagonistic species interactions and limited resources, a species must constantly had to adapt to maintain its relative standing. This became known as theRed Queen hypothesis, as seen in host-parasite interactions.[60]
Pollinating insects areco-adapted with flowering plants.
Incoevolution, where the existence of one species is tightly bound up with the life of another species, new or 'improved' adaptations which occur in one species are often followed by the appearance and spread of corresponding features in the other species. In other words, each species triggers reciprocal natural selection in the other. Theseco-adaptational relationships are intrinsically dynamic, and may continue on a trajectory for millions of years, as has occurred in the relationship betweenflowering plants andpollinating insects.[64][65]
Bates' work on Amazonianbutterflies led him to develop the first scientific account ofmimicry, especially the kind of mimicry which bears his name:Batesian mimicry.[66] This is the mimicry by a palatable species of an unpalatable or noxious species (the model), gaining a selective advantage aspredators avoid the model and therefore also the mimic. Mimicry is thus ananti-predator adaptation. A common example seen in temperate gardens is thehoverfly (Syrphidae), many of which—though bearing no sting—mimic thewarning coloration of aculeateHymenoptera (wasps andbees). Such mimicry does not need to be perfect to improve the survival of the palatable species.[67]
All adaptations have a downside: horse legs are great for running on grass, but they cannot scratch their backs;mammals' hair helps temperature, but offers a niche forectoparasites; the only flying penguins do is under water. Adaptations serving different functions may be mutually destructive. Compromise and makeshift occur widely, not perfection. Selection pressures pull in different directions, and the adaptation that results is some kind of compromise.[71]
It is a profound truth that Nature does not know best; that genetical evolution... is a story of waste, makeshift, compromise and blunder.
Consider the antlers of theIrish elk, (often supposed to be far too large; indeer antler size has anallometric relationship to body size). Antlers serve positively for defence againstpredators, and to score victories in the annualrut. But they are costly in terms of resources. Their size during thelast glacial period presumably depended on the relative gain and loss of reproductive capacity in the population of elks during that time.[74] As another example,camouflage to avoid detection is destroyed when vividcoloration is displayed at mating time. Here the risk to life is counterbalanced by the necessity for reproduction.[75]
Stream-dwelling salamanders, such asCaucasian salamander orGold-striped salamander have very slender, long bodies, perfectly adapted to life at the banks of fast small rivers and mountainbrooks. Elongated body protects theirlarvae from being washed out by current. However, elongated body increases risk of desiccation and decreases dispersal ability of the salamanders; it also negatively affects theirfecundity. As a result,fire salamander, less perfectly adapted to the mountain brook habitats, is in general more successful, have a higher fecundity and broader geographic range.[76]
Thepeacock's ornamental train (grown anew in time for each mating season) is a famous adaptation. It must reduce his maneuverability and flight, and is hugely conspicuous; also, its growth costs food resources. Darwin's explanation of its advantage was in terms ofsexual selection: "This depends on the advantage which certain individuals have over other individuals of the same sex and species, in exclusive relation to reproduction."[77] The kind of sexual selection represented by the peacock is called 'mate choice,' with an implication that the process selects the more fit over the less fit, and so has survival value.[78] The recognition of sexual selection was for a long time in abeyance, but has been rehabilitated.[79]
The conflict between the size of the humanfoetal brain at birth, (which cannot be larger than about 400 cm3, else it will not get through the mother'spelvis) and the size needed for an adult brain (about 1400 cm3), means the brain of a newborn child is quite immature. The most vital things in human life (locomotion, speech) just have to wait while the brain grows and matures. That is the result of the birth compromise. Much of the problem comes from our uprightbipedal stance, without which our pelvis could be shaped more suitably for birth.Neanderthals had a similar problem.[80][81][82]
As another example, the long neck of a giraffe brings benefits but at a cost. The neck of a giraffe can be up to 2 m (6 ft 7 in) in length.[83] The benefits are that it can be used for inter-species competition or for foraging on tall trees where shorter herbivores cannot reach. The cost is that a long neck is heavy and adds to the animal's body mass, requiring additional energy to build the neck and to carry its weight around.[84]
Pre-adaptation occurs when a population has characteristics which by chance are suited for a set of conditions not previously experienced. For example, the polyploidcordgrassSpartina townsendii is better adapted than either of its parent species to their own habitat of saline marsh and mud-flats.[86] Among domestic animals, theWhite Leghorn chicken is markedly more resistant tovitamin B1 deficiency than other breeds; on a plentiful diet this makes no difference, but on a restricted diet this preadaptation could be decisive.[87]
Pre-adaptation may arise because a natural population carries a huge quantity of genetic variability.[88] Indiploid eukaryotes, this is a consequence of the system ofsexual reproduction, where mutant alleles get partially shielded, for example, bygenetic dominance.[89]Microorganisms, with their huge populations, also carry a great deal of genetic variability. The first experimental evidence of the pre-adaptive nature of genetic variants in microorganisms was provided bySalvador Luria andMax Delbrück who developed theFluctuation Test, a method to show the random fluctuation of pre-existing genetic changes that conferred resistance to bacteriophages inEscherichia coli.[90] The word is controversial because it isteleological and the entire concept of natural selection depends on the presence of genetic variation, regardless of the population size of a species in question.
Features that now appear as adaptations sometimes arose by co-option of existing traits, evolved for some other purpose. The classic example is theear ossicles of mammals, which we know frompaleontological andembryological evidence originated in the upper and lowerjaws and thehyoid bone of theirsynapsid ancestors, and further back still were part of thegill arches of early fish.[91][92] The wordexaptation was coined to cover these common evolutionary shifts in function.[93] The flightfeathers of birds evolved from the much earlierfeathers of dinosaurs,[94] which might have been used for insulation or for display.[95][96]
Animals includingearthworms,beavers and humans use some of their adaptations to modify their surroundings, so as to maximize their chances of surviving and reproducing. Beavers create dams and lodges, changing the ecosystems of the valleys around them. Earthworms, as Darwin noted, improve the topsoil in which they live by incorporating organic matter. Humans have constructed extensive civilizations with cities in environments as varied as the Arctic and hot deserts.In all three cases, the construction and maintenance of ecological niches helps drive the continued selection of the genes of these animals, in an environment that the animals have modified.[97]
Some traits do not appear to be adaptive as they have a neutral or deleterious effect on fitness in the current environment. Because genes often havepleiotropic effects, not all traits may be functional: they may be whatStephen Jay Gould andRichard Lewontin calledspandrels, features brought about by neighbouring adaptations, on the analogy with the often highly decorated triangular areas between pairs of arches in architecture, which began as functionless features.[98]
Another possibility is that a trait may have been adaptive at some point in an organism's evolutionary history, but a change in habitats caused what used to be an adaptation to become unnecessary or evenmaladapted. Such adaptations are termedvestigial. Many organisms have vestigial organs, which are the remnants of fully functional structures in their ancestors. As a result of changes in lifestyle the organs became redundant, and are either not functional or reduced in functionality. Since any structure represents some kind of cost to the general economy of the body, an advantage may accrue from their elimination once they are not functional. Examples:wisdom teeth in humans; the loss of pigment and functional eyes in cave fauna; the loss of structure inendoparasites.[99]
If a population cannot move or change sufficiently to preserve its long-term viability, then it will become extinct, at least in that locale. The species may or may not survive in other locales. Species extinction occurs when the death rate over the entire species exceeds the birth rate for a long enough period for the species to disappear. It was an observation of Van Valen that groups of species tend to have a characteristic and fairly regular rate of extinction.[100]
Just as there is co-adaptation, there is also coextinction, the loss of a species due to the extinction of another with which it is coadapted, as with the extinction of aparasitic insect following the loss of its host, or when a flowering plant loses its pollinator, or when afood chain is disrupted.[101][102]
The first stage in the evolution of life on earth is often hypothesized to be theRNA world in which short self-replicatingRNA molecules proliferated before the evolution ofDNA andproteins. By this hypothesis,life started when RNA chains began to self-replicate, initiating the three mechanisms of Darwinian selection: heritability, variation of type, and competition for resources. The fitness of an RNA replicator (its per capita rate of increase) would likely have been a function of its intrinsic adaptive capacities, determined by itsnucleotide sequence, and the availability of resources.[103][104] The three primary adaptive capacities may have been: (1) replication with moderate fidelity, giving rise to heritability while allowing variation of type, (2) resistance to decay, and (3) acquisition of resources.[103][104] These adaptive capacities would have been determined by the folded configurations of the RNA replicators resulting from their nucleotide sequences.
Adaptation raisesphilosophical issues concerning how biologists speak of function and purpose, as this carries implications of evolutionary history – that a feature evolved by natural selection for a specific reason – and potentially of supernatural intervention – that features and organisms exist because of a deity's conscious intentions.[107][108]In his biology, Aristotle introducedteleology to describe the adaptedness of organisms, but without accepting the supernatural intention built intoPlato's thinking, which Aristotle rejected.[109][110] Modern biologists continue to face the same difficulty.[111][112][113][114][115] On the one hand, adaptation is purposeful: natural selection chooses what works and eliminates what does not. On the other hand, biologists by and large reject conscious purpose in evolution. The dilemma gave rise to a famous joke by the evolutionary biologistHaldane: "Teleology is like a mistress to a biologist: he cannot live without her but he's unwilling to be seen with her in public.'"David Hull commented that Haldane's mistress "has become a lawfully wedded wife. Biologists no longer feel obligated to apologize for their use of teleological language; they flaunt it."[116]Ernst Mayr stated that "adaptedness... is ana posteriori result rather than an a priori goal-seeking", meaning that the question of whether something is an adaptation can only be determined after the event.[117]
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