Human(GRCh38.p14)▼Favourite species
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Summary
Sequence- Protein Information
- Genetic Variation
- External References
- ID History
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Transcript: ENST00000633583.1PTPRN2-209
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protein tyrosine phosphatase receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
IA-2BETA, ICAAR, KIAA0387, PHOGRIN
Scaffold HSCHR7_1_CTG7: 160,224-160,337 forward strand.
This transcript has1 exon and maps to20 oligo probes.
This transcript is a product of geneENSG00000282185.1Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000631503.1 | PTPRN2-206 | 114 | 38aa | ENSP00000487683.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0J9YWV3 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000633583.1 | PTPRN2-209 | 114 | 38aa | ENSP00000488906.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0J9YWV3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000633393.1 | PTPRN2-208 | 114 | 38aa | ENSP00000488132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0J9YWV3 | - | TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000632665.1 | PTPRN2-207 | 563 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4, |
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Exons: 1,Coding exons: 1,Transcript length: 114 bps,Translation length: 38 residues
TSL:NA
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ENST00000633583.1
Protein coding
Manual annotation (determined on a case-by-case basis) from the Havana project.
This transcript is a member of theGencode basic gene set.
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Ensembl release 113 - October 2024 ©EMBL-EBIEMBL-EBI
http://asia.ensembl.org
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