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Summary
Sequence- Protein Information
- Genetic Variation
- External References
- ID History
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Transcript: ENST00000622014.4FCAR-325
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Fc alpha receptor [Source:HGNC Symbol;Acc:HGNC:3608]
CD89, FCALPHAR, FCALPHARI
Scaffold HSCHR19LRC_COX2_CTG3_1: 519,558-535,101 forward strand.
This transcript has4 exons, is annotated with8 domains and features and maps to9 oligo probes.
This transcript is a product of geneENSG00000278415.4Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000612836.4 | FCAR-316 | 2476 | 287aa | ENSP00000477977.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JLU6 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000620561.4 | FCAR-323 | 1449 | 239aa | ENSP00000481983.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JNS3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000619953.4 | FCAR-321 | 1080 | 227aa | ENSP00000482539.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JP11 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000618149.4 | FCAR-320 | 837 | 275aa | ENSP00000481387.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JNH4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000617610.4 | FCAR-319 | 830 | 265aa | ENSP00000484613.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JPZ4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000622014.4 | FCAR-325 | 771 | 253aa | ENSP00000478434.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JM27 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000615888.4 | FCAR-318 | 608 | 191aa | ENSP00000484050.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JPP7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000620179.1 | FCAR-322 | 546 | 178aa | ENSP00000478315.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P24071-7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENST00000622349.4 | FCAR-326 | 536 | 142aa | ENSP00000478574.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JM53 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, | |
| ENST00000615192.1 | FCAR-317 | 395 | 117aa | ENSP00000478442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0G2JM28 | - | TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000621443.1 | FCAR-324 | 618 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | - | TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, |
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Exons: 4,Coding exons: 4,Transcript length: 771 bps,Translation length: 253 residues
TSL:1
ENST00000622014.4
Protein coding
Manual annotation (determined on a case-by-case basis) from the Havana project.
This transcript is a member of theGencode basic gene set.
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Ensembl release 113 - October 2024 ©EMBL-EBIEMBL-EBI
http://asia.ensembl.org
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