Movatterモバイル変換

[0]ホーム
URL:

 
Ensembl mirror
Loading…
Search »
Search MouseSearch Mouse
Search all speciesSearch all species
Search Ensembl genomesSearch Ensembl genomes
Search VegaSearch Vega
Search EMBL-EBISearch EMBL-EBI
Search SangerSearch Sanger
Mouse(GRCm39)▼

Favourite species

All species

Recent locations

Transcript-based displays

.

Transcript: ENSMUST00000193050.2Gnb4-208

.

Description

guanine nucleotide binding protein (G protein), beta 4 [Source:MGI Symbol;Acc:MGI:104581]

Gene Synonyms

6720453A21Rik

Location
About this transcript

This transcript has5 exons, is annotated with5 domains and features, is associated with2440 variant alleles and maps to53 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000155737.8Gnb4-2055997340aaENSMUSP00000121127.2
 
Gene/transcipt that contains an open reading frame (ORF).Protein coding
CCDS17297P29387A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl CanonicalGENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE PrimaryA subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic

APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.

APPRIS P1

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000108234.8Gnb4-2012510340aaENSMUSP00000103869.2
 
Gene/transcipt that contains an open reading frame (ORF).Protein coding
CCDS17297P29387A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic

APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.

APPRIS P1

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000193050.2Gnb4-20842373aaENSMUSP00000141196.2
 
Gene/transcipt that contains an open reading frame (ORF).Protein coding
A0A0A6YVN9A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic

TSL 5: A transcript where no single transcript supports the model structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:5
ENSMUST00000184130.7Gnb4-206135683aaENSMUSP00000138886.2
 
Nonsense mediated decay
V9GWY1

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000144292.2Gnb4-2034395No protein-
 
An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron
-

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000143588.2Gnb4-2022388No protein-
 
An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron
-

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000152901.8Gnb4-2042357No protein-
 
An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron
-

TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:1
ENSMUST00000192116.2Gnb4-207728No protein-
 
An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron
-

TSL 3: A transcript where the only support is from a single EST

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.

TSL:3

.

Statistics

Exons: 5,Coding exons: 4,Transcript length: 423 bps,Translation length: 73 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000193050.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of theGencode basic gene set.

.

Ensembl release 114 - May 2025 ©EMBL-EBIEMBL-EBI
http://asia.ensembl.org

.

.

close
[8]ページ先頭
©2009-2025 Movatter.jp