tissue-classification

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ciccalab /SIMPLI

Star36

SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

life-sciences-image gating mcd ome-tiff imc histology image-analysis-workflows tissue-classification cell-segmentation bioimage-informatics bioimaging single-cell-analysis bioimage-analysis histological-images immunofluorescence bioimage-tools imaging-mass-cytometry tissue-analysis

UpdatedJul 11, 2023
R

jopo666 /HistoPrep

Star20

Preprocessing module for large histological images

medical-imaging cut preprocess openslide medical-image-processing tissue-classification pathology medical-image-analysis histological-images pathology-image tissue-analysis histological-slides slide-image

UpdatedJun 16, 2023
Python

"Octopus Realtime Encephalography Lab" is the (hard) real-time networked EEG-lab framework I have developed during my PhD Thesis at Brain Research Lab of Hacettepe University Faculty of Medicine Biophysics Lab. It is meant to be a holistic golden-standard solution for all tasks of cortical source localization/networking, brain-computer interface…

opengl classification inverse-problems qt4 petsc rtai fuzzy-cmeans-clustering deformable-model tissue-classification computer-network beowulf-cluster source-localization k-means-clustering comedi boundary-element-method debian-gnu-linux mri-data forward-modeling eeg-erp realtime-application

UpdatedMar 26, 2025
C++

medgift /PROCESS_L1

Star3

UC1 for PROCESS-project. The use case tackles cancer detection and tissue classification on the latest challenges in cancer research using histopathology images, such as CAMELYON and TUPAC.

tissue-classification wsis

UpdatedMar 24, 2023
Python

canfkoyuncu /TwoTierTissueClassification

Star2

Two-Tier Tissue Decomposition for Histopathological Image Representation and Classification

matlab medical-imaging classification tissue-classification

UpdatedFeb 19, 2017
MATLAB

gtaberna /mrtim

Star2

MR-TIM: MR-based head tissue modelling

mri mri-images neuroinformatics tissue-classification eeg-analysis mri-segmentation tissue-models

UpdatedDec 4, 2020
MATLAB

smujiang /TumorStromaReaction

Star2

Quantitatively evaluate tumor stroma reaction within ovarian cancers, and establish assocaitaions to prognosis, molecular signatures.

ovarian-cancer tissue-classification digital-pathology tissue-segmentation tissue-analysis tumor-stroma-reaction tissue-phenotyping

UpdatedOct 7, 2024
Python

siddh30 /Histopathologic-Cancer-Detection

Star2

A Deep Learning project to classify whether a tumor in tissues is 'Malignant' or 'Benign'. This project aims at incorporating AI in detecting cancer at premature stages helping doctors save more lives.

python deep-learning neural-network image-processing tissue-classification