Tabix.io UI

• UpdatedJan 15, 2023
• TypeScript

GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools

• UpdatedJun 27, 2020
• Perl

Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R

• UpdatedOct 2, 2024
• C

Tabix reader written 100% in Python

• UpdatedSep 3, 2024
• Python

docker-compose for tabix, clickhouse-server and mariadb

• UpdatedApr 29, 2020
• Dockerfile

• UpdatedMay 23, 2023
• Julia

GQuery is a software tool for rapidly querying large numbers of bgzip compressed, tabix indexed genomic data files e.g. vcf, maf, bed, bedGraph, etc. from multiple species with different genome builds without the need to develop, debug, and maintain custom file parsers. Search for particular germline or somatic mutations, copy number changes, di…

• UpdatedApr 14, 2023
• C

A nodejs-based service for requests for tabix-indexed genomic data

• UpdatedNov 12, 2019
• JavaScript

Sample Clickhouse cluster deployment with chproxy

• UpdatedApr 28, 2021
• Batchfile

tabix.io Backend

• UpdatedJan 29, 2018
• PHP

SQL projects

• UpdatedAug 31, 2023
• Jupyter Notebook

Tabix (nginx based) docker image

• UpdatedJul 12, 2022
• Dockerfile

Works completed within the SQL module of the Data Analyst course on the Karpov Courses platform

• UpdatedNov 29, 2023
• Jupyter Notebook

echoverse module: Tabix indexing and querying.

• UpdatedNov 17, 2023
• R

Reading and manipulating WGBS data

• UpdatedFeb 25, 2025
• R