Analyze your RNA sequencing data without writing a single line of code

• UpdatedJan 30, 2025
• Python

command lines tool to annotate miRNAs with a standard mirna/isomir naming

• UpdatedNov 8, 2024
• Python

Small RNAseq pipeline for paired-end reads

• UpdatedOct 18, 2024
• Python

3'Adapter in small RNA sequencing

• UpdatedMar 27, 2019

visualization of seqcluster output, try at:

• UpdatedJun 19, 2019
• JavaScript

RNA-seq, smRNA-seq, scRNA-seq & ATAC-seq workflows for@cornell-TREX

• UpdatedMar 27, 2024
• Shell

Small non-coding RNA analysis template for analysing Illumina small RNAseq data.

• UpdatedApr 1, 2022
• HTML

Extracellular Vesicle Contents of Mouse Trophoblast Cells and Their Predicted Influence on Fetal Brain Development

• UpdatedMar 1, 2024
• HTML

This package creates segmentation of the genome into regions of biological significance from high-throughput sequencing data.

• UpdatedJul 19, 2018
• R

Fully automated analysis pipeline for planarian piRNAs

• UpdatedAug 2, 2023

The scripting part of my Dissertation with the data analysis of all the datasets I used

• UpdatedAug 8, 2022

Bioinformatic differential expression analyses pipeline to investigate biomarkers in Parkinson disease.

• UpdatedMay 12, 2022
• R