sbml-simulation
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COBRApy is a package for constraint-based modeling of metabolic networks.
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Oct 29, 2025 - Python
COnstraint Based Reconstruction and EXascale Analysis (in Julia)
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Sep 26, 2025 - Julia
LibSBMLSim: A library for simulating SBML models
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Sep 14, 2021 - C
A Python package for "classic" Constraint-Based Reconstruction and Analysis (COBRA) and the new COBRA with kinetics (COBRA-k). Link to documentation:
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Oct 14, 2025 - Python
Spatial Model Simulator with SBML Model
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Nov 11, 2021 - C++
LibSBMLSim: A library for simulating SBML models (Version 2)
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Jan 24, 2020 - HTML
Easily usable JavaFx-based inSilico module for dynamic Systems Biology Markup Language (SBML) model simulation visualization. Provides an intuitive Graphical User Interface for dynamic processing based on SBSCL.
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Jul 11, 2020 - Java
Analysis of Dynamic Adaptations in Parameter Trajectories
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Apr 12, 2021 - Jupyter Notebook
Vue3 Project using Pyodide / basico and python-copasi emscripten
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Jul 22, 2025 - CSS
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