multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test:http://multiPrime.cn)

• UpdatedFeb 28, 2025
• Python

Acconeer Exploration Tool

• UpdatedFeb 5, 2025
• Python

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

• UpdatedFeb 11, 2025
• R

Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files

• UpdatedMar 11, 2025
• C++

The software behind Chai's open-source Real-Time PCR instrument

• UpdatedJan 28, 2025
• C++

Infineon Embedded Linux TPM Toolbox 2 (ELTT2) for TPM 2.0

• UpdatedJul 18, 2022
• C

PCR Primer Quality Control

• UpdatedMar 20, 2024

Display PCR, DTS, PTS, bitrate, jitter of a mpeg TS.

• UpdatedMar 1, 2020
• C++

This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.

• UpdatedOct 19, 2024

In-silico PCR, primer design and padlock design for in-situ sequencing

• UpdatedOct 23, 2024
• C++

基于Mirai 使用 java开发的 bot框架，在消息事件下封装了指令/权限指令 方便调用，内置公主连接/公主连结工会战功能（公会战改版后不再适用），接入chat-gpt

• UpdatedJan 12, 2024
• Java

会长我挂树了 - 公主连结 vscode-rainbow-fart 扩展语音包 (Priconne extension vocal pack)

• UpdatedJul 10, 2020

The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.

• UpdatedApr 24, 2024
• Python

MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity

• UpdatedFeb 16, 2021
• Python

Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.

• UpdatedFeb 21, 2025
• Python

[ICCV 2021] CPD with Local Surface Geometry (LSG-CPD)

• UpdatedJun 22, 2023
• MATLAB

Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products

• UpdatedOct 31, 2024
• JavaScript

A PCR primer tool for DNA assembly flows

• UpdatedApr 24, 2024
• Python

This is a user space TSS for TPM 2.0. It implements the functionality equivalent to (but not API compatible with) the TCG TSS working group's ESAPI, SAPI, and TCTI API's (and perhaps more) but with a hopefully simpler interface.

• UpdatedFeb 26, 2025
• C

An R Package for Multiplex PCR Primer Design and Analysis

• UpdatedJan 17, 2024
• R