pathology-image
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Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
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Jun 7, 2024 - Python
Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]
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Mar 20, 2025 - Python
Image data augmentation on-the-fly by add new class on transforms in PyTorch and torchvision.
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Jan 8, 2023 - Python
Contextual Attention Network: Transformer Meets U-Net
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Mar 29, 2022 - Jupyter Notebook
BIRL: Benchmark on Image Registration methods with Landmark validations
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Jan 4, 2022 - Python
Attention-Challenging Multiple Instance Learning for Whole Slide Image Classification (ECCV2024)
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Mar 5, 2025 - Python
BrainPainter - Brain Visualisation Software
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Feb 28, 2023 - Python
🔬 Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.
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Nov 22, 2022 - Python
Scripts forhttps://www.nature.com/articles/s41598-018-27707-4, using Convolutional Neural Network to detect lung cancer tumor area
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Apr 8, 2021 - Python
Whole Slide Digital Pathology Image Tissue Localization
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Oct 3, 2023 - Python
A Large Language-Vision Assistant for Pathology Image Understanding (BIBM-2024)
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Mar 9, 2025 - Python
Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
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Mar 19, 2021 - Python
The code for Kernel attention transformer (KAT)
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Jun 13, 2024 - Python
Preprocessing module for large histological images
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Jun 16, 2023 - Python
LabelSlide is a slide annotation tool and label object bounding boxes in virtual slides (generally used in pathology)
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Jun 28, 2021 - JavaScript
Simple prototype of converting whole slide image (WSI) to multiframe DICOM images
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Nov 25, 2022 - Python
A curated list of awesome Multi-instance Learning frameworks for Whole Slide Images (WSIs) classification, segmentation, etc.
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Aug 5, 2024
H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net
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Jul 30, 2024 - Python
Noise Robust Learning with Hard Example Aware for Pathological Image classification
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Nov 15, 2022 - Python
AEM: Attention Entropy Maximization for Multiple Instance Learning based Whole Slide Image Classification
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Oct 20, 2024 - Python
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