Movatterモバイル変換

Skip to content

#

nucleotide

Here are 11 public repositories matching this topic...

Language:All

Filter by language

All11 Python4 R2 Go1 JavaScript1 Lua1 Perl1 Shell1

Sort:Most stars

Sort options

Most stars Fewest stars Most forks Fewest forks Recently updated Least recently updated

instadeepai /nucleotide-transformer

🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

deep-learning genomics dna transformer language-model nucleotide

UpdatedFeb 11, 2025
Python

ncbi /icn3d

web-based protein structure viewer and analysis tool interactively or in batch mode

nodejs delphi webgl vr ar jupyter-notebook chemical protein snp nucleotide structure-viewer 3d-structure 3d-viewer molecular-viewer icn3d protein-viewer

UpdatedMar 3, 2025
JavaScript

SNPGenie

chasewnelson /SNPGenie

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

evolution perl next-generation-sequencing vcf population-genetics dnds-estimation molecular-evolution nucleotide fasta-sequences vcf-files diversity-measurement sequence-analysis dnds natural-selection snp-report nucleotide-diversity evolutionary-parameters substitution-rate nei-gojobori

UpdatedAug 21, 2023
Perl

drostlab /metablastr

Seamless Integration of BLAST Sequence Searches in R

protein species blast blast-searches nucleotide biological-sequences blasting blastn blast-search sequence-diversity biomartr blast-hits

UpdatedSep 10, 2023
R

Eslam-Samir-Ragab /Sequence-database-curator

This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).

bioinformatics gene database genomics genetics metagenomics protein fasta proteomics sequence fastq ncbi nucleotide curator redundancy

UpdatedMay 9, 2019
Python

quantori /FastqHeat

Python wrapper created to help download metagenomic data from SRA or ENA databases

python metagenomics aspera nucleotide sra fasterq-dump

UpdatedAug 19, 2022
Python

0xnu /nwunsch

Needleman–Wunsch algorithm implementation in Go.

bioinformatics protein nucleotide nucleotides needlemanwunsch nucleotide-sequence

UpdatedApr 11, 2024
Go

chasewnelson /Soni-response

Scripts, analysis code, input data, and intermediate files for response to Soni et al.

diversity evolution slim nucleotide natural-selection nucleotide-diversity covid-19 sars-cov-2 evolutionary-simulation intrahost-genetic-diversity intrahost

UpdatedApr 20, 2024
R

0xnu /nwunsch_lua

Needleman–Wunsch algorithm implementation in Lua.

bioinformatics protein nucleotide nucleotides needlemanwunsch nucleotide-sequence

UpdatedApr 25, 2024
Lua

Shubhashisdas /nucleotide_content

DNA nucleotide count

count gc fasta nucleotide

UpdatedJun 4, 2023
Shell

M-Kasaei /Sequelyzer

Sequelyzer is a tool designed to help you calculate the proportion of each nucleobase (A, T, C, and G) and CG in a DNA/RNA sequence, and find its reverse complement

tool percentage calculate dna reverse rna proportion nucleotide dna-sequences complement reverse-complement adenine cytosine thymine guanine nucleobases nucleobase sequelyzer uracil

UpdatedJan 22, 2023
Python

Improve this page

Add a description, image, and links to thenucleotide topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with thenucleotide topic, visit your repo's landing page and select "manage topics."

[8]ページ先頭

©2009-2025 Movatter.jp