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limma-voom
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A Snakemake workflow and MrBiomics module for performing and visualizing differential (expression) analyses (DEA) on NGS data powered by the R package limma.
visualizationworkflowbioinformaticsrna-seqsnakemakerstatisticsscrna-seqchip-seqatac-seqlimmabiomedical-data-sciencedifferential-expression-analysisvolcano-plotlimma-voomlimma-trend
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Mar 6, 2025 - R
A quick recap of widely used differential analyses methods in R for RNA-seq experiments
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Dec 7, 2024
RNA-seq alignment and analysis pipeline
bioinformaticsrna-seqrpipelineslurmgene-expressionalignmentstardifferential-gene-expressionlimma-voom
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Jul 16, 2021 - R
RNA-Seq Data Analysis in R: From Raw Counts to Differential Expression Analysis
bioinformaticsrna-seqrnaseqdeseq2rnarna-seq-analysisdifferential-expressionedgerlimmarnaseq-workshoprna-seq-pipelinedifferential-expression-analysisrnaseq-pipelinernaseq-datalimma-voomdeseq2-analysis
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Feb 13, 2025 - HTML
Example code supporting immunology research
cancertcgaimmunologyshiny-appstranscriptomicsdifferential-expressionmungingelisasurvival-predictionflowcytometrylimma-voomkirc
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Oct 11, 2023 - HTML
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