hg38

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jingxinfu /TCGAdnloader

Star4

TCGA hg19 and hg38 data downloader.

rna-seq snv cnv tcga-data hg19 hg38

UpdatedNov 25, 2020
Python

nuno-agostinho /alternativeSplicingEvents.hg38

Star2

Alternative splicing event annotation for Human assembly (hg38)

annotation bioconductor alternative-splicing hg38

UpdatedJan 5, 2021
R

LieberInstitute /recount3-docs

Star2

Documentation for all things related to `recount3`

human mouse rstats bioconductor rnaseq recount hg38 recount2 mm10 recount3

UpdatedDec 13, 2024
R

pweidner /BamQC-pipeline

Star0

Snakemake workflow to generate BAM alignment statistics on the BIH cluster.

quality-control snakemake sequencing bam hg38 mm10 t2t

UpdatedDec 10, 2024
Python

mansikath /Variant-calling

Star0

Repository for variant calling utilizing bioinformatics tools and databases

java bioinformatics python3 linux-shell bioinformatics-pipeline samtools genome-analysis bioinformatics-analysis variant-analysis ubantu fastqc minimap2 bioinformatics-tool hg38 gatk4 human-genome

UpdatedJul 9, 2024

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