glioma

Star

Here are 34 public repositories matching this topic...

Language:All

Filter by language

All34 Python17 Jupyter Notebook9 MATLAB4 JavaScript1 R1

Sort:Most stars

Sort options

Most stars Fewest stars Most forks Fewest forks Recently updated Least recently updated

shalabh147 /Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks

Star170

Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.

deep-neural-networks deep-learning medical-imaging segmentation dice-scores keras-tensorflow survival-models dice-coefficient brain-tumor-segmentation unet-3d cnn-segmentation vnet3d survival-prediction glioma mri-segmentation dice-loss brats-dataset aiformedicine unet-architecture

UpdatedJul 24, 2020
Jupyter Notebook

neuronflow /BraTS-Toolkit

Star87

Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.

mri medical-imaging segmentation glioblastoma glioma

UpdatedSep 26, 2024
Python

MIC-DKFZ /image-time-series

Star24

Code for deep learning-based glioma/tumor growth models

tumor-growth glioma neural-processes attentive-neural-processes

UpdatedNov 30, 2021
Python

edukait /glioma-classification

Star15

The purpose of this project is to be able to automatically and efficiently segment and classify high-grade and low-grade gliomas.

machine-learning segmentation convolutional-neural-networks support-vector-machines classification-task random-forest-classifier brats2018 glioma

UpdatedFeb 27, 2019
Jupyter Notebook

ReubenDo /jSTABL

Star13

Learning joint Segmentation of Tissues And Brain Lesions (jSTABL) from task-specific hetero-modal domain-shifted datasets

pytorch segmentation brain domain-adaptation glioma missing-modalities

UpdatedMar 24, 2025
Python

pykao /BraTS2018-survival-prediction

Star10

We provide a method to extract the tractographic features from structural MR images for patients with brain tumor

machine-learning connectomics tractography survival-prediction brats2018 fiber-tracts overall-survival-prediction tractographic-feature glioma

UpdatedNov 8, 2018
Python

JiajinChen /APOLLO

Star7

APOLLO is an Accurate and independently validated Prediction mOdel of Lower-grade gLiomas Overall survival

prediction-model online-tool glioma

UpdatedApr 17, 2022
R

tomealbuquerque /multimodal-glioma-biomarkers-detection

Star7

Multimodal Context-Aware Detection of Glioma Biomarkers using MRI and WSI

deep-learning mri-images biomarker-discovery digital-pathology multimodal-deep-learning glioma

UpdatedMar 4, 2024
Python

Computational-Imaging-LAB /IRIS-MRS-AI

Star6

IRIS-MRS-AI is a tool that classifies IDH and TERTp mutations in gliomas. Besides these capabilities, IRIS-MRS-AI is a tool that can create custom models using users' data.

mrs machine-learning tool glioma mrshub

UpdatedApr 4, 2022
MATLAB

saizk /GlioScan

Star5

IDH Classification for Gliomas using CNN and Transformers.

deep-learning transformers cnn mri neural-networks classification magnetic-resonance-imaging cnn-classification glioma attention-classification captk idh idh-classification idh-status

UpdatedSep 26, 2023
Jupyter Notebook

peterlipan /FoF

Star5

The official implementations of our BIBM'24 paper: Focus on Focus: Focus-oriented Representation Learning and Multi-view Cross-modal Alignment for Glioma Grading

tcga multimodality tcga-data glioblastoma cancer-grading glioma histopathology-images ieee-bibm pathology-images pathology-classification bibm-2024 tcga-gbm tcga-lgg

UpdatedNov 9, 2024
Python

sakhadyaksa /DeepGliomaThesis

Star4

An implementation of Mask R-CNN algorithm to perform automatic object detection, localization, classification and instance segmentation of immunoreactive tumor cells on Ki-67 stained glioma images.

maskrcnn glioma

UpdatedJun 26, 2021
Jupyter Notebook

aaravdave /NEXT-3D

Star4

NEXT 3D is a preclinical tool to optimize nanoparticle designs for BBB penetration in the treatment of glioblastoma multiforme, a proliferative central nervous system cancer.

cancer cancer-imaging-research cancer-research nanoparticles glioblastoma glioma nanoparticle nanoparticle-analysis glioblastoma-drug-discovery

UpdatedJan 31, 2025

andreped /neukit

Star3

🤗 neukit: web application for automatic brain extraction and preoperative tumor segmentation from MRI

demo deep-learning web-app tumor mri spaces segmentation brain brain-extraction t1 metastasis pretrained glioma huggingface meningioma raidionics low-grade high-grade

UpdatedNov 7, 2023
Python

BrainLesion /deep_quality_estimation

Star3

Quality estimation for BraTS glioma segmentation models

mri segmentation brain glioma

UpdatedNov 27, 2024
Python

CatelijneW44 /TumorRecognition

Star3

Automated Detection of Brain Abnormalities in MRI Scans using Image Analysis

ai matlab detection tumor mri svm-model glioblastoma glioma

UpdatedMar 13, 2025
MATLAB

aaravdave /Glioblasted-Prototype

Star2

Glioblasted is a machine learning model to assist in the detection of glioblastoma multiforme, a high-grade, aggressive form of central nervous system cancer.

cancer cancer-research cancer-detection glioblastoma glioma cancer-diagnosis cancer-prediction cancer-classification