flowcytometry
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The complete FlowSOM package known from R, now available in Python!
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Jan 24, 2025 - Python
Pipeline for flow cytometry anlaysis
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Jul 28, 2024 - Python
Official implementation of Towards Self-Explainable Transformers for Cell Classification in Flow Cytometry Data
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Jul 16, 2023 - Python
HDStIM: High Dimensional Stimulation Immune Mapping
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Oct 5, 2023 - R
Cell Analyzer for Flow Experiment
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Jan 19, 2025 - Python
Flow Cytometry analysis in R | Proteomics
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Nov 13, 2024 - HTML
This neural-network can predict the effector/memory T cell (T lymphocyte) subset of single cells based on flow cytometry data with 99,22% accuracy.
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May 6, 2022 - Jupyter Notebook
R package to identify and remove redundant information in bivariate flow cytometry data, in order to improve the quality of the training sets for machine learning algorithms.
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Sep 15, 2023 - R
Anonymization app for project Phenotyping Lymphoma with an Artificial Intelligence Toolbox (PLAIT) based on R shiny; access website and AI via eduroam
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Aug 24, 2021 - C++
Uncovering Determinants of TIL Expansion in High-Grade Gliomas through Immunophenotyping, TCR Profiling, Single-Cell, Spatial Transcriptomics, and Proeteomics
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Feb 25, 2025
Reporting page of the HVP Innovation Award 2019
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Jan 23, 2020
A collection of code used to analyze flow cytometry and root density data
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Jun 10, 2021 - R
Code for Karakaslar, Katiyar et al., Aging Cell 2023
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Aug 21, 2022 - HTML
Interactive exploring Multi Dimensional Scaling projections
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Mar 14, 2025 - R
Example code supporting immunology research
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Oct 11, 2023 - HTML
Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab
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Sep 6, 2023 - R
Extract Fluorescence Distribution Data From FCS Files And Recalculate To Events Per Volume
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Mar 22, 2022 - R
Code for GUI visualization of data, for import of GuavaMuse .FCS files, for flow cytometry style gating, and for calculating enrichment and depletion after a given procedure.
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Sep 30, 2021 - Python
These are iPython notebooks used for analysis in my 2019 ABC-selectivity paper.
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Feb 17, 2020 - Jupyter Notebook
A collection of tools provided by HIMSR
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Sep 25, 2024 - Python
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