dihedral-angles
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An open library for the analysis of molecular dynamics trajectories
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Mar 19, 2025 - Python
Convert XYZ data to bond lengths & angles, calculate contacts, planes and dihedral angles and print tables
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Feb 22, 2024 - Python
Molecular Dynamics Simulation of Alanine Dipeptide and Dihedral Angle Analysis
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Jan 2, 2024 - Python
Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.
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Feb 25, 2025 - Jupyter Notebook
a set of classes and submodules to build, manipulate and analyse three-dimensional protein structures.
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Sep 10, 2019 - Python
Python script to find all instances of an amino acid sequence motif in protein structures and parse their internal coordinates
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Sep 14, 2023 - Python
A python tool for Classification of ligand conformations based on Torsion angles
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Feb 19, 2023 - Python
This script aims at reading a given PDB file and generation dihedral angles from it.
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Sep 27, 2017 - Python
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Apr 25, 2018 - Python
An autoencoder designed for dimensionality reduction of a protein structure's feature space that describes the structural environment of an amino acid by looking at the relative relative positions, orientations and dihedral angles of neighbouring residues in Euclidean space.
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Dec 1, 2024 - Python
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