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duo-labs /cloudmapper

CloudMapper helps you analyze your Amazon Web Services (AWS) environments.

aws security diagram cytoscape

UpdatedJul 15, 2024
JavaScript

dash-cytoscape

plotly /dash-cytoscape

Interactive network visualization in Python and Dash, powered by Cytoscape.js

data-science bioinformatics plotly network-graph computational-biology dash biopython graph-theory cytoscape network-visualization cytoscapejs plotly-dash

UpdatedAug 9, 2025
Python

cytoscape /ipycytoscape

A Cytoscape Jupyter widget

binder jupyter-notebook cytoscape

UpdatedOct 6, 2025
Python

Or3stis /apparatus

A graphical security analysis tool for IoT networks

iot cytoscape apparatus security-analysis security-iot asto

UpdatedApr 17, 2019
JavaScript

networks-science-course

chatox /networks-science-course

A course on Network Science, including network formation models, structural patterns, and dynamic processes.

python networkx cytoscape network-analysis

UpdatedNov 5, 2025
Jupyter Notebook

cytoscape /py4cytoscape

Python library for calling Cytoscape Automation via CyREST

python workflow cytoscape workflow-automation py2cytoscape cytoscape-interfaces

UpdatedAug 16, 2025
Python

PathwayCommons /cytoscape-sbgn-stylesheet

View biological networks via Cytoscape.js and sbgn-ml

javascript svg science es6 graph biology graphs lab uoft cytoscape networks sbgn sbgn-renderer cytoscape-graph-json javasript-library bader

UpdatedFeb 9, 2021
JavaScript

Visualizing-Global-Trade-Networks

lomska /Visualizing-Global-Trade-Networks

Python script that visualizes international commodity trade networks quickly and beautifully

python api bootstrap plotly data-visualization economics networkx dash cytoscape trade network-analysis comtrade pygraphviz vizualisation

UpdatedFeb 5, 2024
Python

lmangani /gun-scape

GunDB Cytoscape Graph Visualizer + Live Editor

editor graph gun cytoscape gundb relations

UpdatedSep 19, 2021
JavaScript

graphml-viewer

Abhi5h3k /graphml-viewer

Quick and simple web based solution to visualize GraphMl network diagrams

d3 angular dataviz dashboard analytics graph network cytoscape cytoscapejs graphml visualization-application datavisualization dataanalytics abhi5h3k networkanalysis force-direced

UpdatedOct 16, 2023
TypeScript

fslaborg /Cytoscape.NET

.NET interface for Cytoscape.js written in F#

visualization csharp fsharp graph dotnet network cytoscape

UpdatedMay 10, 2023
F#

BaderLab /EnrichmentMapApp

The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.

java enrichment cytoscape

UpdatedOct 7, 2024
Java

upsetjs /cytoscape.js-bubblesets

Cytoscape.js Bubblesets plugin

javascript cytoscape cytoscapejs cytoscapejs-extension bubblesets

UpdatedOct 4, 2025
TypeScript

ebeshero /DHClass-Hub

a repository to help introduce and orient students to the GitHub collaboration environment, and to support DH classes.

javascript css svg html xml regex xslt xpath xquery cytoscape relaxng tei networkanalysis regularexpressions tei-odd

UpdatedAug 22, 2020
HTML

cytoscape /cytoscape-web

A browser-based implementation of Cytoscape for network visualization and analysis. Runs entirely in your browser with data-driven styling, collaborative workflows, and Cytoscape ecosystem integration.

systems-biology data-visualization cytoscape network-analysis network-biology

UpdatedNov 5, 2025
TypeScript

corwur /cytoscapeneo4j

Cytoscape plugin for neo4j

plugin java neo4j cytoscape cypher-query

UpdatedAug 15, 2025
Java

aszilagyi /tabnetviz

Table-based network visualizer

graphviz data-visualization cytoscape networks command-line-tool graph-visualization network-visualization bioinformatics-visualization edge-table visual-attributes

UpdatedJul 3, 2024
Python

leovan /cytoscape-manual

Cytoscape 中文用户手册 | Cytoscape User Manual (Chinese Version)

cytoscape complex-networks network-visualization network-analysis network-visualisation cytoscape-manual

UpdatedAug 23, 2025

peng-ye /MetaPGN

A pipeline for construction and graphical visualization of annotated pangenome networks.

visualization metagenomics cytoscape pangenomics

UpdatedOct 24, 2018
Perl

michaelbushe /cytoscape-angular

Angular component for Ctyoscape graphs.

finance bioinformatics graph graph-algorithms graph-theory cytoscape graph-visualization cytoscapejs cytoscape-graph-json graph-visualizer

UpdatedOct 5, 2025
TypeScript

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