collagen
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Python package that uses colorspace-based segmentation to analyze histopathology images.
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Feb 7, 2024 - Python
Intelligent System for Analysis, Model Building And Rational Design.
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Apr 20, 2018 - Python
A python package to analyze the matrix fiber orientation and intensity around cells in fiber matrices (as a proxy for cellular forces).
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Jan 17, 2025 - Python
A Python package to conduct 3D Traction Force Microscopy on multicellular aggregates (spheroids).
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Dec 16, 2024 - Python
A web application for atomistic modelling of coiled coils and collagens.
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Nov 22, 2023 - Elm
ImageJ / FIJI script to analyse picrosirius red stained sections imaged under polarising light
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Oct 2, 2020
MSDS Thesis - Pan-Collagen Survival Analysis of CNV in Ovarian Cancer
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Aug 29, 2021 - HTML
Species identification based on mass spectrometry biomarker clustering
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Apr 18, 2019 - Jupyter Notebook
ImageJ / FIJI script to assess the orientation of collagen fibres in SHG images
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Oct 2, 2020
Matlab based program for automatic chain tracing for AFM images of single molecule collagen, DNA, and other polymers.
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Jun 23, 2022 - MATLAB
chain tracing program developed to analyze AFM images of single molecules
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Jul 27, 2022 - MATLAB
Expression, biological and clinical relevance of the collagen pathway genes in prostate carcinoma
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Feb 26, 2024 - R
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