The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage athttp://tripal.info for documentation, support, and other information. The Drupal project page is athttp://drupal.org/project/tripal.

• UpdatedMar 18, 2025
• PLpgSQL

This repository provides users with a framework to store, search and visualize biological data.

• UpdatedFeb 25, 2025
• PLpgSQL

🐳 Apollo 2.X Docker Image

• UpdatedJun 18, 2019
• Shell

• UpdatedFeb 27, 2023
• PHP

🐳📊📚 Galaxy + Apollo + Chado + Tripal + JBrowse + JBrowse REST API + PostGraphQL + JBrowse GraphQL Experiment all as a docker-compose.yml

• UpdatedDec 20, 2018
• Python

Extension module for the Tripal toolset to show differential expression data. This module was made for Drupal 7, Tripal 3, and Chado 1.3.

• UpdatedOct 18, 2024
• PHP

entity converter for tripal 3

• UpdatedSep 21, 2018
• PHP

compiles copies of the Chado database and dumps the SQL for use in other tools.

• UpdatedDec 3, 2022
• Python

Offers 3 different flavors of docker containers that can be built upon to deploy Drupal and Tripal sites.

• UpdatedMar 20, 2019
• Dockerfile

⛔ ARCHIVED ⛔ Interface to 'FlyBase'

• UpdatedMay 10, 2022
• R

Mainlab Chado Loader

• UpdatedJul 13, 2018
• PHP

COMBAT-TB model is a Chado inspired graph model for genome annotation.

• UpdatedApr 20, 2021
• Python

Mainlab Chado Search: enabling advanced search function for a Tripal/Chado database

• UpdatedFeb 3, 2020

A Drush-based loader for VCF files that follows the genotype storage rules outlined by ND genotypes.

• UpdatedApr 21, 2023
• PHP

Extends core Tripal with support focused on genotypic data, genetic markers, sequence variants, etc.

• UpdatedNov 17, 2022

Work pertaining to import and analytics of unknown data source (mass spec), example of Chado integration

• UpdatedJan 3, 2018
• PLpgSQL

Drupal/Tripal code for the MedicagoGenome.org site (MTGD)

• UpdatedFeb 21, 2018
• PHP

• UpdatedFeb 10, 2024
• PHP

📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

• UpdatedOct 5, 2022
• Java

A minified bioinformatics dataset for seeding Tripal sites

• UpdatedJan 3, 2019
• Python