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cellxgene

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Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

  • UpdatedMar 14, 2025
  • Jupyter Notebook

GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools

  • UpdatedMar 4, 2025
  • R

Final project for DDLS2024 by Daniil Sarkisyan

  • UpdatedOct 27, 2024
  • Jupyter Notebook

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