biostatistics
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Explainable Machine Learning in Survival Analysis
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Jun 15, 2024 - R
Open source bioinformatics and computational biology toolbox written in F#. This is the core package containing type models and parsers/writers.
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Apr 25, 2025 - F#
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
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May 21, 2024 - mupad
SurvSHAP(t): Time-dependent explanations of machine learning survival models
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Jan 4, 2024 - Jupyter Notebook
Biostatistics resources : reading list, RMarkdown notebooks, and more!
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Sep 11, 2025 - HTML
🎯 📕 Targeted Learning in R: A Causal Data Science Handbook
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Oct 24, 2024 - TeX
Group sequential design for clinical trials
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Oct 9, 2025 - R
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
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Oct 10, 2023 - R
Conquering confounds and covariates: methods, library and guidance
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Mar 21, 2024 - Python
R package for High dimensional data analysis and integration with O2PLS!
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Jul 18, 2025 - HTML
R package for fitting joint models to time-to-event data and multivariate longitudinal data
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Feb 4, 2025 - R
A Python package for gene network analysis
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Jun 22, 2022 - Python
Analysis of simulation studies including Monte Carlo error
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May 16, 2024 - R
Clinical Trial Simulations
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Aug 29, 2023 - R
Power and Sample Size Calculation
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Aug 27, 2025 - Visual Basic 6.0
Repository that contains all the data, code and manuscript files for a paper that explores the use of GAMs in biomedical research.
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Jun 3, 2024 - TeX
missing data handing: visualize and impute
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Jul 31, 2019 - Python
R package for fitting joint models to time-to-event and longitudinal data
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Dec 30, 2024 - R
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