An R 📦 for fast and flexible DNA methylation analysis

• UpdatedJul 24, 2024
• R

A Python package for fast operations on 1-dimensional genomic signal tracks

• UpdatedApr 3, 2020
• Python

FileIO.jl integration for bedGraph files

• UpdatedMay 9, 2024
• Julia

Decode coverage.bedGraph files that use the run-length encoding format.

• UpdatedApr 27, 2023
• Jupyter Notebook

These scripts examine and display visual representations of .bedGraph and .bed files associated with CHIP-seq datasets.

• UpdatedMay 23, 2023
• Python

Generate mappability tracks as BigWig file from genome fasta with GEM

• UpdatedOct 24, 2017
• Python

A Shiny app for plotting bedgraphs on short sequences.

• UpdatedFeb 19, 2024
• R

Read and write support for bedGraph file format.

• UpdatedMay 5, 2024
• Julia