3d-unet

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.

deep-neural-networks deep-learning pytorch brats medical-image-segmentation 3d-unet deepmedic pytorch-deepmedic pytorch-3d-unet brain-tumor-segmentaiton

UpdatedJul 17, 2020
Python

zyl200846 /3D-UNet-PyTorch-Implementation

Star101

The implementation of 3D-UNet using PyTorch

cross-validation pytorch unet semantic-segmentation volumetric-data 3d-segmentation pytorch-implementation 3d-unet

UpdatedFeb 20, 2025
Python

zubair-irshad /NeRF-MAE

Star94

[ECCV 2024] Pytorch code for our ECCV'24 paper NeRF-MAE: Masked AutoEncoders for Self-Supervised 3D Representation Learning for Neural Radiance Fields

transformers vit representation-learning nerf 3d 3d-deep-learning semantic-segmantation differentiable-rendering 3d-detection feature-pyramid-network self-supervised-learning 3d-unet multi-view region-proposal-network masked-autoencoder neural-rendering neural-radiance-fields vision-transformers instant-ngp super-resoluion

UpdatedMar 18, 2025
Python

frankkramer-lab /covid19.MIScnn

Star93

Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data

computer-vision deep-learning tensorflow medical-imaging segmentation medical-image-processing infection lung-segmentation u-net medical-image-analysis pneumonia 3d-unet lung-disease covid-19 lung-lobes covid-19-ct healthcare-imaging

UpdatedMar 25, 2023
Python

s-mostafa-a /Luna16

Star79

Developing a well-documented repository for the Lung Nodule Detection task on the Luna16 dataset. This work is inspired by the ideas of the first-placed team at DSB2017, "grt123".

notebook paper jupyter-notebook pytorch medical-imaging yolo lung-cancer-detection data-augmentation augmentation medical-image-processing data-science-bowl-2017 lung-nodule-detection luna16 3d-object-detection 3d-unet ct-scan-images 3d-preprocessing dsb2017 nodule-net

UpdatedSep 8, 2021
Jupyter Notebook

fitushar /3DUnet_tensorflow2.0

Star33

This Repo is for implementation of 3D unet in Tensorflow 2.0v

dice-coefficient 3d-unet tensorflow2-3d-segmentation-model 3d-unet-tf2 binary-segmentation

UpdatedApr 24, 2020
Python

RawthiL /PET_DeepAttCorrection

Star23

Whole Body Positron Emission Tomography Attenuation Correction Map Synthesizing using 3D Deep Networks

gan computed-tomography positron-emission-tomography 3d-unet attenuation-map 3d-pix2pix

UpdatedMay 1, 2023
Python

shivangi-aneja /Multi-Modal-Brain-Segmentation

Star20

3D Multi-modal (FLAIR and T1) Brain MRI Scan Segmentation using Generative Adversarial Learning

cnn semi-supervised-learning segmentation 3d-gan adversarial-learning brain-segmentation 3d-unet

UpdatedDec 16, 2019
Python

jphdotam /Unet3D

Star18

A 3D Unet for Pytorch for video and 3D model segmentation

pytorch unet unet-3d 3d-unet

UpdatedJan 28, 2021
Python

motokimura /kits19_3d_segmentation

Star15

PyTorch implementation of 3D U-Net for kidney and tumor segmentation from KiTS19 CT scans.

computer-vision pytorch medical-imaging ct-scans 3d-images 3d-unet kits19

UpdatedAug 10, 2022
Jupyter Notebook

ishaanb92 /PyTorch-UNet

Star13

PyTorch implementation of the UNet model --https://arxiv.org/abs/1505.04597

pytorch medical-imaging image-segmentation u-net unet-pytorch 3d-unet

UpdatedApr 8, 2021
Python

fshnkarimi /3D-Liver-Segmentation

Star12

Automatically segment the liver and liver tumors in CT scans with 3D-UNET

python pytorch medical-imaging unet liver-segmentation medical-image-analysis 3d-unet torchio

UpdatedJun 8, 2022
Jupyter Notebook

ShouYuqing /3D-UNet-for-Segmentation

Star10

CNN for segmentation of 3D images

supervised-learning mri-images 3d-unet

UpdatedMar 24, 2020
Python

tamerthamoqa /3D-mri-brain-tumour-image-segmentation-medical-decathlon-tensorflow

Star10

Code repository for training a brain tumour U-Net 3D image segmentation model using the 'Task1 Brain Tumour' medical segmentation decathlon challenge dataset.

tensorflow keras medical-imaging image-segmentation multi-gpu brain-tumor 3d-unet 3d-image-segmentation

UpdatedSep 16, 2021
Python

atakehiro /3D-U-Net-pytorch-model-parallel

Star9

PyTorch implementation of 3D U-Net with model parallel in 2GPU for large model

pytorch model-parallelism 3d-unet

UpdatedAug 9, 2020
Python

jacobzhaoziyuan /HCR-MT

Star8

[EMBC 2021] Official Implementation for "Hierarchical Consistency Regularized Mean Teacher for Semi-supervised 3D Left Atrium Segmentation"

ssl pytorch semi-supervised-learning convolutional-neural-networks image-segmentation unet medical-image-analysis 3d-unet

UpdatedMay 26, 2022
Python

Inc0mple /3D_Brain_Tumor_Seg_V2

Star7

Using the BraTS2020 dataset, we test several approaches for brain tumour segmentation such as developing novel models we call 3D-ONet and 3D-SphereNet, our own variant of 3D-UNet with more than one encoder-decoder paths.

computer-vision deep-learning pytorch unet brats brain-tumor-segmentation unet-3d unet-image-segmentation 3d-unet brats2020

UpdatedApr 29, 2023
Jupyter Notebook

Improve this page

Add a description, image, and links to the3d-unet topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the3d-unet topic, visit your repo's landing page and select "manage topics."

Learn more

Movatterモバイル変換

Navigation Menu

Search code, repositories, users, issues, pull requests...

Provide feedback

Saved searches

Use saved searches to filter your results more quickly