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I'm a bioinformatician working on microbial (meta)genomics :DNA:
🤖 I like tinkering with nextflow:
📦 Some tools are available via Bioconda :
| 🧬 🚀seqfu | ⛰️bamtocov | 🖌️dadaist2 | 🛠️qax |
|---|---|---|---|
| to extract coverage tracks from BAM files | to analyze 16s/ITS from reads to R | utilities for Qiime2 artifacts |
📖 I use GitHub also for training material
| 📓microbiome bioinformatics | 🧔Personal website | 💻bash training | 🎥Companion videos |
|---|---|---|---|
| Some tutorials | A small blog | Toy files to practice Bash | A Youtube channel |
I'm usingMastodon