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@pinellolab

Pinello Lab

Massachusetts General Hospital/Harvard Medical School

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  1. STREAMSTREAMPublic

    STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

    Jupyter Notebook 178 50

  2. CRISPResso2CRISPResso2Public

    Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

    Python 308 104

  3. haystack_biohaystack_bioPublic

    Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

    HTML 47 11

  4. CRISPR-SURFCRISPR-SURFPublic

    Python 17 3

  5. PrimeDesignPrimeDesignPublic

    Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!

    Python 23 6

  6. MotifRaptorMotifRaptorPublic

    Explore the effect of genetic variants on transcription factor binding sites

    Python 8 2

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