Movatterモバイル変換


[0]ホーム

URL:


Skip to content

Navigation Menu

pinellolab

Search code, repositories, users, issues, pull requests...

Provide feedback

We read every piece of feedback, and take your input very seriously.

Saved searches

Use saved searches to filter your results more quickly

Sign up
@pinellolab

Pinello Lab

Massachusetts General Hospital/Harvard Medical School

PinnedLoading

  1. STREAMSTREAMPublic

    STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

    Jupyter Notebook 174 50

  2. CRISPResso2CRISPResso2Public

    Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

    Python 297 99

  3. haystack_biohaystack_bioPublic

    Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

    HTML 47 11

  4. CRISPR-SURFCRISPR-SURFPublic

    Python 15 3

  5. PrimeDesignPrimeDesignPublic

    Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!

    Python 23 6

  6. MotifRaptorMotifRaptorPublic

    Explore the effect of genetic variants on transcription factor binding sites

    Python 8 2

Repositories

Loading
Type
Select type
Language
Select language
Sort
Select order
Showing 10 of 57 repositories
  • pyrovelocity Public

    𝒫robabilistic modeling of RNA velocity ⬱

    pinellolab/pyrovelocity’s past year of commit activity
    Python 47AGPL-3.0 5 10 17 UpdatedMar 24, 2025
  • pinellolab/ACCESS-pipeline’s past year of commit activity
    0MIT0 0 0 UpdatedMar 21, 2025
  • pinellolab/CRISPR_Pipeline’s past year of commit activity
    Python 4MIT 2 4 0 UpdatedMar 20, 2025
  • DNA-Diffusion Public

    🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨

    pinellolab/DNA-Diffusion’s past year of commit activity
    Python 382 52 2 11 UpdatedMar 17, 2025
  • CRISPRme Public
    pinellolab/CRISPRme’s past year of commit activity
    Python 20 8 0 1 UpdatedMar 10, 2025
  • CRISPResso2 Public

    Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

    pinellolab/CRISPResso2’s past year of commit activity
    Python 297 99 36 3 UpdatedMar 7, 2025
  • crisprapido Public

    use WFA2 to scan for CRISPR guide targets

    pinellolab/crisprapido’s past year of commit activity
    Rust 1 2 0 0 UpdatedFeb 26, 2025
  • crispr-bean Public

    Base Editing screens' Activity-Normalized variant effect size estimation

    pinellolab/crispr-bean’s past year of commit activity
    Python 9AGPL-3.0 1 1 1 UpdatedFeb 7, 2025
  • ACCESS-ATAC-seq Public

    Scripts for ACCESS-ATAC-seq data

    pinellolab/ACCESS-ATAC-seq’s past year of commit activity
    Python 1MIT0 0 0 UpdatedJan 17, 2025
  • CRISPR-Correct Public

    Perform CRISPR guide mapping and analysis that considers protospace self-editing and surrogate sensor sequences. Self-editing aware mapping takes a hamming-distance approach unbiased by expectations in editing patterns.

    pinellolab/CRISPR-Correct’s past year of commit activity
    Python 2AGPL-3.00 3 0 UpdatedJan 15, 2025

Top languages

Loading…

Most used topics

Loading…


[8]ページ先頭

©2009-2025 Movatter.jp