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1. STREAMSTREAMPublic

   STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

   Jupyter Notebook 177 50

2. CRISPResso2CRISPResso2Public

   Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

   Python 310 104

3. haystack_biohaystack_bioPublic

   Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

   HTML 47 11

4. CRISPR-SURFCRISPR-SURFPublic

   Python 17 3

5. PrimeDesignPrimeDesignPublic

   Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!

   Python 24 6

6. MotifRaptorMotifRaptorPublic

   Explore the effect of genetic variants on transcription factor binding sites

   Python 8 2