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• Phys. Rev. E 99, 063315
• arXiv:1808.08630

Dependenices are handled using theCPM.cmake manager.There is no need to download and install any libraries manually, simply proceed to the contents below.

For reference, the libraries downloaded by the package manager are:

• Dynamic Boltzmann library, specifically v3.1here.
  • This further requires (also automatically managed):
  • Q3C1 library, specifically v2.0here.
  • Armadillo, specifically v9.300.2here.
• LatticeGillespie library for stochastic simulations, specifically v1.0here.

Folders:

• hermite: this generates a simple figure of the Hermite polynomials.
• bimol_train_stoch_sim: generates training data for theA+A->0 reaction.
• bimol_train: trains the hidden & visible layer models for theA+A->0 reaction.
• bimol_test_stoch_sim: generates testing data for theA+A->0 reaction.
• bimol_test: tests the learned differential equations system for visible & hidden layer models for theA+A->0 reaction.
• rossler_stoch_sims: generates training data for the Rossler system.
• rossler_dynamic_3sp: learns and tests the Rossler system.