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Example for computing region occupancy#615

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fromniko-region-occupancy-example

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Description

What is this PR

  • Bug fix
  • Addition of a new feature
  • Other

Why is this PR needed?
Closes#415

What does this PR do?

Adds a new "Time spent in regions of interest" example based on the Elevated Plus Maze (EPM) dataset.
This example guides the user through:

  • Drawing ROIs asnapari Shapes and saving the using nativenapari functionality
  • Loading said shaped intomovementPolygonOfInterest objects
  • Conputing occupancy across the defined regions
  • Quantifying % time spent per region

References

Closes#415
Closes#410

How has this PR been tested?

Please explain how any new code has been tested, and how you have ensured that no existing functionality has changed.

Is this a breaking change?

No.

Does this PR require an update to the documentation?

This PR is mostly an update to the documentaiton.

Checklist:

  • The code has been tested locally
  • Tests have been added to cover all new functionality
  • The documentation has been updated to reflect any changes
  • The code has been formatted withpre-commit

@niksirbiniksirbiforce-pushed theniko-region-occupancy-example branch fromd8d4085 to8c6b3fcCompareJune 17, 2025 17:48
@sonarqubecloud
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Quality Gate FailedQuality Gate failed

Failed conditions
C Reliability Rating on New Code (required ≥ A)

See analysis details on SonarQube Cloud

Catch issues before they fail your Quality Gate with our IDE extensionSonarQube for IDE

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codecovbot commentedJun 17, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 100.00%. Comparing base(6fe3ffc) to head(8c6b3fc).

Additional details and impacted files
@@            Coverage Diff            @@##              main      #615   +/-   ##=========================================  Coverage   100.00%   100.00%           =========================================  Files           32        32             Lines         1786      1786           =========================================  Hits          1786      1786

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Write new sphinx-gallery example, showcasing time spent in regions of interest Example for "quick plot" functions

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@niksirbi
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