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Commite2b0d2c

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northcentral
1 parent4f13356 commite2b0d2c

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‎NEWS.md‎

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#soilReports 0.9
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* All reports have been moved to folders based on "new" combined region names. "region2" becomes "southwest", "region11" becomes "northeast". These conversions are built in to the report listing and initialization functions for backward compatibility.
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* All reports have been moved to folders based on "new" combined region names. "region2" becomes "southwest", "region11" becomes "northcentral". These conversions are built in to the report listing and initialization functions for backward compatibility.
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#soilReports 0.8
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‎R/utils.R‎

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@@ -73,7 +73,7 @@ prettySummary <- function(x, p = c(0, 0.25, 0.5, 0.75, 1), n = TRUE, signif = TR
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.convert_region<-function(x) {
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if (grepl("^region[0-9]+.*$",x)) {
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lut<- c(region2="southwest",
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region11="northeast")
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region11="northcentral")
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old<- gsub("^(region[0-9])+.*$","\\1",x)
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new<- gsub(paste0("^",old),lut[old],x)
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message("Replacing",x," with",new)
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stop("Could not find report:",x,call.=FALSE)
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}
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x
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}
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}

‎README.md‎

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@@ -61,8 +61,8 @@ remotes::install_github("ncss-tech/soilReports", dependencies = FALSE, upgrade_d
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+[Shiny Pedon Summary](https://github.com/ncss-tech/soilReports/tree/master/inst/reports/southwest/shiny-pedon-summary)
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* Region 11
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+[Component Summary by Project](https://github.com/ncss-tech/soilReports/tree/master/inst/reports/northeast/component_summary_by_project)
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+[MUPOLYGON Summary by Project](https://github.com/ncss-tech/soilReports/tree/master/inst/reports/northeast/mupolygon_summary_by_project)
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+[Component Summary by Project](https://github.com/ncss-tech/soilReports/tree/master/inst/reports/northcentral/component_summary_by_project)
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+[MUPOLYGON Summary by Project](https://github.com/ncss-tech/soilReports/tree/master/inst/reports/northcentral/mupolygon_summary_by_project)
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##Example Output

‎inst/reports/northeast/component_summary_by_project/README.md‎

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# run the report manually
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## copy to your workspace2 folder
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copyReport(reportName="northeast/component_summary_by_project",outputDir="C:/workspace2/component_summary")
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copyReport(reportName="northcentral/component_summary_by_project",outputDir="C:/workspace2/component_summary")
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## open the "report.Rmd" file from "C:/workspace2/component_summary" in RStudio, and hit the "Knit HTML" button
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## run the report via commandline
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reports= listReports()
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reports= subset(reports,name=="northeast/component_summary_by_project")
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reports= subset(reports,name=="northcentral/component_summary_by_project")
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render(input=reports$file.path,
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output_dir="C:/workspace2",
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output_file="C:/workspace2/comp_summary.html",

‎inst/reports/northeast/lab_summary_by_taxonname/report.Rmd‎

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smooth_scroll:no
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params:
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series:!r as.character("Miami")
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genhz_rules:!r as.character(file.path(system.file(package = "soilReports"), "reports/northeast/lab_summary_by_taxonname/genhz_rules/Generic_rules.R"))
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genhz_rules:!r as.character(file.path(system.file(package = "soilReports"), "reports/northcentral/lab_summary_by_taxonname/genhz_rules/Generic_rules.R"))
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editor_options:
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chunk_output_type:console
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---

‎inst/reports/northeast/mupolygon_summary_by_project/README.md‎

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# run the report manually
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## copy to your workspace2 folder
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copyReport(reportName="northeast/mupolygon_summary_by_project",outputDir="C:/workspace2/mupolygon_summary")
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copyReport(reportName="northcentral/mupolygon_summary_by_project",outputDir="C:/workspace2/mupolygon_summary")
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## Open the "report.Rmd" file from "C:/workspace2/mupolygon_summary" in RStudio, and hit the "Knit HTML" drop down arrow and select "Knit with Paramters..." menu item. Modify the parameters accordingly.
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## run the report via commandline
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reports= listReports()
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reports= subset(reports,name=="northeast/mupolygon_summary_by_project")
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reports= subset(reports,name=="northcentral/mupolygon_summary_by_project")
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render(input="C:/workspace2/mupolygon_summary/report.Rmd",
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output_dir="C:/workspace2",
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output_file="C:/workspace2/mupolygon_summary.html",

‎inst/reports/northeast/pedon_summary_by_taxonname/report.Rmd‎

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smooth_scroll:no
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params:
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series:!r as.character("Miami")
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genhz_rules:!r as.character(file.path(system.file(package = "soilReports"), "reports/northeast/pedon_summary_by_taxonname/genhz_rules/Generic_rules.R"))
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genhz_rules:!r as.character(file.path(system.file(package = "soilReports"), "reports/northcentral/pedon_summary_by_taxonname/genhz_rules/Generic_rules.R"))
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---
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```{r setup, echo=FALSE, warning=FALSE}

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