mirTOP

miRNA transcriptome open project

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mirtopmirtopPublic
command lines tool to annotate miRNAs with a standard mirna/isomir naming
Python 18 25
mirGFF3mirGFF3Public
GFF3 format with miRNA and isomiR information from sequencing data
15 6
mirgff3_shinymirgff3_shinyPublic
a Rshiny tool to visualize mirgff3 files
R 1
simulatorsimulatorPublic
first ideas and brainstorming for small RNA simulator
C++

Repositories

Showing 10 of 10 repositories

mirtop Public
command lines tool to annotate miRNAs with a standard mirna/isomir naming
miRTop/mirtop’s past year of commit activity
Python 18MIT 25 35 (16 issues need help) 1 UpdatedNov 8, 2024
miRTOP.github.io Public
project for small RNA standard annotations
miRTop/miRTOP.github.io’s past year of commit activity
HTML 3MIT 2 5 (1 issue needs help) 1 UpdatedApr 11, 2022
academic-kickstart Public template Forked fromHugoBlox/theme-academic-cv
📝 Easily create a beautiful website using Academic, Hugo, and Netlify
miRTop/academic-kickstart’s past year of commit activity
Shell0MIT 6,418 0 1 UpdatedOct 18, 2019
isomir_accuracy_meta_analysis Public
meta-analysis of public dataset to measure isomiR accuracy
miRTop/isomir_accuracy_meta_analysis’s past year of commit activity
R00 0 0 UpdatedSep 24, 2019
simulator-analysis Public
code to analyze the simulator data
miRTop/simulator-analysis’s past year of commit activity
R00 1 0 UpdatedSep 13, 2019
smadann Public
nextflow pipeline to guess and trimmed samples
miRTop/smadann’s past year of commit activity
Nextflow00 0 0 UpdatedAug 22, 2019
mirGFF3 Public
GFF3 format with miRNA and isomiR information from sequencing data
miRTop/mirGFF3’s past year of commit activity
15 6 8 (3 issues need help) 0 UpdatedAug 5, 2019
mirgff3_shiny Public
a Rshiny tool to visualize mirgff3 files
miRTop/mirgff3_shiny’s past year of commit activity
R0MIT 1 17 0 UpdatedJun 12, 2019
incubator Public
Where all ideas and discussions happen to lead to new repositories
miRTop/incubator’s past year of commit activity
R 4 4 23 1 UpdatedApr 25, 2019
simulator Public
first ideas and brainstorming for small RNA simulator
miRTop/simulator’s past year of commit activity
C++00 0 0 UpdatedNov 11, 2018