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@metagenome-atlas

metagenome-atlas

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  1. atlasatlasPublic

    ATLAS - Three commands to start analyzing your metagenome data

    Python 384 100

  2. TutorialTutorialPublic

    A tutorial for Metagenome-Atlas

    MAXScript 23 13

Repositories

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Showing 10 of 30 repositories
  • atlas Public

    ATLAS - Three commands to start analyzing your metagenome data

    metagenome-atlas/atlas’s past year of commit activity
    Python 384BSD-3-Clause 100 9 9 UpdatedMar 17, 2025
  • metagenome-assembly Public

    Workflow module for metagenome assembly

    metagenome-atlas/metagenome-assembly’s past year of commit activity
    Python 2MIT0 0 0 UpdatedJun 25, 2024
  • snakemake-wrappers Public Forked fromsnakemake/snakemake-wrappers

    This is the development home of the Snakemake wrapper repository, see

    metagenome-atlas/snakemake-wrappers’s past year of commit activity
    CAP CDS0 191 0 1 UpdatedJan 15, 2024
  • Tutorial Public

    A tutorial for Metagenome-Atlas

    metagenome-atlas/Tutorial’s past year of commit activity
    MAXScript 23GPL-3.0 13 4 2 UpdatedNov 24, 2023
  • genecatalog_atlas Public

    Extended genecatalog workflow for metagenome-atlas

    metagenome-atlas/genecatalog_atlas’s past year of commit activity
    Python 1MIT0 0 0 UpdatedSep 27, 2023
  • metagenome-atlas/genome-annotator’s past year of commit activity
    Python 3MIT0 1 0 UpdatedSep 27, 2023
  • supp_data_atlas Public

    Supplementary data for Atlas manuscript

    metagenome-atlas/supp_data_atlas’s past year of commit activity
    Jupyter Notebook 1 1 0 0 UpdatedSep 27, 2023
  • metagenome-atlas/plasmid_atlas’s past year of commit activity
    Python 1MIT0 0 0 UpdatedSep 27, 2023
  • kingfisher_workflow Public Forked fromtrickovicmatija/kingfisher_workflow

    This is a workflow that allows you to download whole projects and metadata with kingfisher. Additionally, it takes care about merging same samples together.

    metagenome-atlas/kingfisher_workflow’s past year of commit activity
    Python0MIT 1 0 0 UpdatedAug 31, 2023
  • snake_gtdbtk Public

    A snakemake for GTDB-tk

    metagenome-atlas/snake_gtdbtk’s past year of commit activity
    Python 5 1 0 0 UpdatedAug 31, 2023

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