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@lcrawlab

Crawford Lab

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  1. BANNsBANNsPublic

    Code and simulations using biologically annotated neural networks

    HTML 21 3

  2. i-LDSCi-LDSCPublic

    Code and simulations using interaction-LD score regression

    Python 13 1

  3. mvMAPITmvMAPITPublic

    The multivariate MArginal ePIstasis Test

    R 11 1

  4. SINATRASINATRAPublic

    A statistical framework for feature selection and association mapping with 3D shapes

    R 8 4

  5. recallrecallPublic

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    R 4

  6. SINATRA-ProSINATRA-ProPublic

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    Python 4

Repositories

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Showing 10 of 19 repositories
  • recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    lcrawlab/recall’s past year of commit activity
    R 40 0 0 UpdatedMar 18, 2025
  • lcrawlab/recallreproducibility’s past year of commit activity
    R00 0 0 UpdatedFeb 13, 2025
  • callback Public archive

    Calibrated clustering via knockoffs for single-cell genomics

    lcrawlab/callback’s past year of commit activity
    R 100 0 0 UpdatedFeb 13, 2025
  • sme Public

    A fast and scalable method to detect epistasis in complex traits from biobank-scale studies

    lcrawlab/sme’s past year of commit activity
    C++ 10 0 0 UpdatedJan 17, 2025
  • cancer-drug-synergy-prediction Public

    Github repo for cancer drug synergy prediction work

    lcrawlab/cancer-drug-synergy-prediction’s past year of commit activity
    Jupyter Notebook0MIT0 0 0 UpdatedDec 28, 2024
  • Geneformer Public
    lcrawlab/Geneformer’s past year of commit activity
    Python00 0 0 UpdatedDec 14, 2024
  • mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    lcrawlab/mvMAPIT’s past year of commit activity
    R 11GPL-3.0 1 0 0 UpdatedOct 21, 2024
  • i-LDSC Public

    Code and simulations using interaction-LD score regression

    lcrawlab/i-LDSC’s past year of commit activity
    Python 13GPL-3.0 1 1 0 UpdatedJul 2, 2024
  • multio-viz Public

    A platform for the interactive assessment of gene regulatory networks

    lcrawlab/multio-viz’s past year of commit activity
    R 3GPL-3.00 0 0 UpdatedMay 10, 2024
  • SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    lcrawlab/SINATRA-Pro’s past year of commit activity
    Python 4MIT0 0 0 UpdatedMar 14, 2024

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