Kuster Lab

The Kuster Lab comprises an international research team with a focus on proteomics, chemical biology and biomarker discovery

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Technical University of Munich
http://proteomics.wzw.tum.de

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prositprositPublic archive
Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019"…
Python 85 45
SIMSI-TransferSIMSI-TransferPublic
Similarity-based Isobaric MS2 Identification Transfer
Python 2 3

Repositories

Showing 10 of 28 repositories

topas-pipeline Public
Automated (phospho)proteomics processing pipeline for large patient cohorts providing cohort as well as patient-specific insights.
kusterlab/topas-pipeline’s past year of commit activity
Python0Apache-2.00 0 0 UpdatedMar 18, 2025
topas-portal Public
Exploratory web-based tool for clinical proteomics TOPAS platform
kusterlab/topas-portal’s past year of commit activity
Python0Apache-2.00 0 0 UpdatedMar 16, 2025
curve_curator Public
Analysis platform for large-scale dose-dependent data
kusterlab/curve_curator’s past year of commit activity
Python 23Apache-2.0 3 5 0 UpdatedMar 13, 2025
SIMSI-Transfer Public
Similarity-based Isobaric MS2 Identification Transfer
kusterlab/SIMSI-Transfer’s past year of commit activity
Python 2Apache-2.0 3 7 0 UpdatedMar 13, 2025
picked_group_fdr Public
Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments
kusterlab/picked_group_fdr’s past year of commit activity
Jupyter Notebook 11Apache-2.0 5 7 0 UpdatedMar 13, 2025
psite_annotation Public
Python module for annotating a pandas dataframe with phosphosites, e.g. PhosphoSitePlus annotations, kinase-substrate relations, domain information, etc.
kusterlab/psite_annotation’s past year of commit activity
Python 4Apache-2.00 2 0 UpdatedFeb 26, 2025
ProSIMSIt Public
kusterlab/ProSIMSIt’s past year of commit activity
Python 1Apache-2.00 0 0 UpdatedFeb 26, 2025
enrichment-server Public
kusterlab/enrichment-server’s past year of commit activity
HTML0Apache-2.00 0 0 UpdatedFeb 19, 2025
biowc-pathwaygraph Public
Interactive Visualization of Signaling Pathways
kusterlab/biowc-pathwaygraph’s past year of commit activity
TypeScript 2Apache-2.00 0 0 UpdatedFeb 19, 2025
pathway-importer Public
Download and Convert Pathways from KEGG and WikiPathways
kusterlab/pathway-importer’s past year of commit activity
Python 1Apache-2.00 0 0 UpdatedNov 27, 2024