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1. miscellanomicsmiscellanomicsPublic

   A miscellaneous of R scripts for microarrays, RNA-seq, ChIP-seq and co-expression networks. Some ODE models of networks motifs using COPASI are also included.

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2. BRC1NETBRC1NETPublic

   A web based app developed using the R package shiny to explore the transcriptional network downstream from the Arabidopsis thaliana transcriptional factor BRC1.

   R 4 1

3. ChlamyNETChlamyNETPublic

   A web based tool developed using the R package shiny to explore a Chlamydomonas reinhardtii gene co-expression network

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4. ATTRACTORATTRACTORPublic

   Arabidopsis Thaliana TRanscriptionAl Circadian neTwORk, a web based tool developed using the R package shiny for the exploration and analysis of a transcriptional network in Arabidopsis thaliana co…

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5. AlgaeFUNAlgaeFUNPublic

   MicroAlgae Functional Annotation Web based Tool Developed using the R package Shiny

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6. RmetageneplotsRmetageneplotsPublic

   A custom R script to generate metageneplots from bw files obtained from ChIP-seq data analysis

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