Senior Scientist at IIMCB in Warsaw, with PhD in Organic Chemisty and seven years of experience in Pharma Industry R&D (MedChem and Computer Aided Drug Design). Currently working on data-driven computational methods for RNA-small molecule ligands.

• Computing since 1988 (Timex)
• Programming since 1989 (BASIC and logo 🐢)
• Chemistry since 1990 (water electrolysis)
• In the internet since 1994 (EARN and Bitnet, gopher and telnet)
• Linux since kernel 2.0.39 (freesco)
• Machine learning since 2010 (Decision Trees and KNIME 2.3.0)

Google Scholar record | orcid:0000-0001-5758-9416

• Binding mode prediction with new scoring function AnnapuRNA. Combination of statistical data extracted from X-ray structures and Machine Learning.
  • repo |📄 the paper
• RNA-ligandInteraction detection and classification with fingeRNAt.
  • repo |📄 the paper
• Structural Interaction Fingerprints and Machine Learning forpredicting and explaining binding of small molecule ligands to RNA.
  • repo |📄 the paper

• Tox21 challenge - Prediction of Compounds Activity Using ML and Low-Dimensional Molecular Descriptors
  • repo |📄 the paper
• Predict Protein Stability Index (PSI) from the sequence with ML regression
  • repo |📄 the paper
• Tox24 challenge - Prediction of Compounds Activity Using ML and Low-Dimensional Molecular Descriptors (2)
  • repo

• Indoor cat localization using Bluetooth beacons and Machine Learning 🐱.
  • repo
• autowx2 - a set of programs and scripts for schedule satellite and ground recordings with SDR dongle. Bundled plugins include scripts for processing weather APT images from NOAA or METEOR satellites, ISS voice communication recordings, and more 📡 .
  • repo
• Statistics of mass-running events (from 5K to marathons)
  • repo

• Console monitor for mqtt stream, with colors and filters
  • repo |Awesome MQTT
• telegraf2rrd - pass data from telegraf to RRD database.
  • repo

• How to link GitHub repositories with Zenodo to get a DOI and comply with NCN rules
  • repo
• Training materials for students of Computer Aided Drug Desing at WUT
  • repo

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1. cat-localizercat-localizerPublic

   Localize your cat at home with BLE beacon, ESP32s, and Machine Learning

   Jupyter Notebook 606 30

2. signalssignalsPublic

   signal processing and todo

   Shell 27 2

3. autowx2autowx2Public

   The program for scheduling recordings and processing of the satellite and ground radio transmissions (like capturing of the weather APT images from NOAA satellites, voice messages from ISS, fixed t…

   Python 76 16

4. mqtt-monitormqtt-monitorPublic

   pretty print mqtt messages in console

   Python 8

5. fingernat-mlfingernat-mlPublic

   Data accompanying the manuscript on SIFts- and ML-based methods in Virtual Screening for RNA binding ligands.

   5 1

6. telegraf2rrdtelegraf2rrdPublic

   Pass data from telegraf to RRD database.

   Shell 1