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qurro Public
Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples
biocore/qurro’s past year of commit activity
JavaScript 33BSD-3-Clause 10 125 (4 issues need help) 0 UpdatedMar 13, 2025
unifrac-binaries Public
biocore/unifrac-binaries’s past year of commit activity
C++ 2BSD-3-Clause 9 3 0 UpdatedMar 11, 2025
micov Public
Aggregate genome coverage
biocore/micov’s past year of commit activity
Python 4 5 8 0 UpdatedMar 10, 2025
metagenomics_pooling_notebook Public
Jupyter notebooks to assist with sample processing
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Python 8MIT 16 58 (2 issues need help) 0 UpdatedMar 10, 2025
deblur Public
Deblur is a greedy deconvolution algorithm based on known read error profiles.
biocore/deblur’s past year of commit activity
Python 93BSD-3-Clause 40 14 12 UpdatedMar 8, 2025
mg-scripts Public
Knight Lab internal Metagenomic processing scripts for demultiplexing, QC and host removal
biocore/mg-scripts’s past year of commit activity
Python 1BSD-3-Clause 5 19 1 UpdatedMar 6, 2025
microsetta-private-api Public
A private microservice to support The Microsetta Initiative
biocore/microsetta-private-api’s past year of commit activity
Python 6BSD-3-Clause 19 63 2 UpdatedMar 3, 2025
microsetta-interface Public
The Microsetta participant facing user interface
biocore/microsetta-interface’s past year of commit activity
Jinja 1BSD-3-Clause 17 44 4 UpdatedFeb 26, 2025
microsetta-admin Public
biocore/microsetta-admin’s past year of commit activity
Python0BSD-3-Clause 10 16 4 UpdatedFeb 15, 2025
calour Public
exploratory and interactive microbiome analyses based on heatmaps
biocore/calour’s past year of commit activity
Python 27BSD-3-Clause 22 62 5 UpdatedJan 27, 2025