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@alexpreynolds
alexpreynolds
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Alex Reynolds alexpreynolds

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Pug caregiver, curler, cyclist, gardener, beginning French scholar
  • Altius Institute for Biomedical Sciences
  • Seattle, WA USA

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  1. bedops/bedopsbedops/bedopsPublic

    🔬 BEDOPS: high-performance genomic feature operations

    C 319 61

  2. samplesamplePublic

    Performs memory-efficient reservoir sampling on very large input files delimited by newlines

    C 69 12

  3. byte-storebyte-storePublic

    Generate and explore upper triangular and square matrices of 1-byte values

    C 2 2

  4. sodasodaPublic

    Python-based UCSC genome browser snapshot-taker and gallery-maker

    JavaScript 12 3

  5. kmer-collapsekmer-collapsePublic

    Collapse a set of redundant kmers to use IUPAC degenerate bases

    Python 3

  6. filter-regionsfilter-regionsPublic

    Filter genomic regions by score and proximity

    Python 1


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