Hi! ToxPi GitHub 🏡. For more information on ToxPi see:
Marvel SW, To K, Grimm FA, Wright FA, Rusyn I, Reif DM. ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models. BMC Bioinformatics. 2018. 19(1):80.https://doi.org/10.1186/s12859-018-2089-2
→Stand-alone Java application (GUI) available attoxpi.org
→Download the GUI User Manual along (PDF) attoxpi.org/Manual
Filer DL, Patisaul HB, Schug T, Reif D, Thayer, K. Test driving ToxCast: endocrine profiling for 1858 chemicals included in phase II. Current Opinion in Pharmacology. 2014. 19:145-152.https://doi.org/10.1016/j.coph.2014.09.021
→Methodological advancement in score calculation used in all subsequent ToxPi implementations
Reif DM, Martin MT, Tan SW, Houck KA, Judson RS, Richard AM, Knudsen TB, Dix DJ, Kavlock RF. Endocrine profiling and prioritization of environmental chemicals using ToxCast data. Environmental Health Perspectives. 2010. 118(12):1714-20.https://doi.org/10.1289/ehp.1002180
→Original publication
Fleming J, Marvel SW, Supak S, Motsinger-Reif AA, Reif DM. ToxPi*GIS Toolkit: creating, viewing, and sharing integrative visualizations for geospatial data using ArcGIS. J Expo Sci Environ Epidemiol. 2022 Apr 26:1–8.https://www.nature.com/articles/s41370-022-00433-w
→Toolkit for integrating ToxPi models with GIS mapping applications
Readpublished uses of the ToxPi framework
PinnedLoading
Repositories
- ToxPi-Weight-Optimization Public
Scripts and results used in Fleming et al, scripts are prior to method incorporation with the toxpiR package and for generating paper results only
ToxPi/ToxPi-Weight-Optimization’s past year of commit activity