Repository files navigation

Program described in the jounal paper, "POLY2TET: A Computer Program for Conversion of Computational Human Phantoms from Polygonal Mesh to Tetrahedral Mesh", submitted to Journal of Radiological Protection.

Installation can be done very simply by two lines below.

cmake .make

./POLY2TET [options] MRCP_AM.obj  options:  -g : generate Geant4 code  -m : generate MCNP6 input file  -p : generate PHITS input file  -c : positive integer number to replace zero-region number (and not defined regions, when used as -rc)  -mat/m : material file in MCNP6 format

Input PM phantom should be prepared as OBJ file format that includes the whole phantom; there is no need to prepare OBJ files for each organ. In the OBJ file, each organ should be defined as a shell group named as the corresponding organ ID. Note that for the user’s convenience, POLY2TET allows to add descriptions to be followed after organ ID, but those two needs to be separated by an underscore (e.g., 9500 or 9500_Liver).

For the generation of the Monte-Carlo code inputs, please provide material file in MCNP format.Below is the example. Please note that you should keep the format of the comment lines (Cname, density g/cm3).

C Liver 1.060 g/cm3m9500     1000      -0.102     6000      -0.132     7000      -0.031     8000      -0.723     11000      -0.002     15000      -0.002     16000      -0.003     17000      -0.002     19000      -0.003CC Lung 0.415 g/cm3m9700     1000      -0.102     6000      -0.108     7000      -0.032     8000      -0.748     11000      -0.001     15000      -0.001     16000      -0.002     17000      -0.003     19000      -0.002     26000      -0.001C

For the Monte Carlo dose calculations, the corresponding code should be installed in the computer.

Go to the folder where MCNP6 input file is generated, and then execute MCNP6 with the input file named (phantom_name)_MPNP6.i.

MCNP6 n=(phantom_name)_MCNP6.i

Go to the folder where PHITS input file is generated, and then execute PHITS with the input file named (phantom_name)_PHITS.pin.

phits.sh (phantom_name)_PHITS.pin

In the folder where Geant4 source code is generated, compile the source code for Geant4 first, and execute the code with the lines below.

cmake .make./(phantom_name) -m (macro_file_name) -o (ouput_file_name)

Han H et al.,2020, POLY2TET: A Computer Program for Conversion of Computational Human Phantoms from Polygonal Mesh to Tetrahedral Mesh, J. Radiol. Prot.(on process)