MIT Laboratory for Computational Physiology

Research on improving health care through data analysis, including use of MIMIC-III and other data sources

Popular repositoriesLoading

mimic-codemimic-codePublic
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
Jupyter Notebook 2.8k 1.6k
wfdb-pythonwfdb-pythonPublic
Native Python WFDB package
Jupyter Notebook 777 312
eicu-codeeicu-codePublic
Code and website related to the eICU Collaborative Research Database
Jupyter Notebook 336 223
mimic-ivmimic-ivPublic archive
Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
Python 278 97
mimic-cxrmimic-cxrPublic archive
Code, documentation, and discussion around the MIMIC-CXR database
Jupyter Notebook 274 58
mimic-omopmimic-omopPublic
Mapping the MIMIC-III database to the OMOP schema
PLpgSQL 132 48

Repositories

Showing 10 of 83 repositories

physionet-build Public
The new PhysioNet platform.
MIT-LCP/physionet-build’s past year of commit activity
JavaScript 60BSD-3-Clause 24 425 30 UpdatedMar 29, 2025
mimic-code Public
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
MIT-LCP/mimic-code’s past year of commit activity
Jupyter Notebook 2,783MIT 1,578 255 14 UpdatedMar 27, 2025
django-static-mathjax Public
MathJax package for Django
MIT-LCP/django-static-mathjax’s past year of commit activity
Python0Apache-2.00 0 0 UpdatedMar 14, 2025
mimic-iv-ecg-ve Public
Vector Embedding Pipeline for MIMIC-IV-ECG
MIT-LCP/mimic-iv-ecg-ve’s past year of commit activity
Python0MIT0 0 0 UpdatedMar 8, 2025
wfdb-python Public
Native Python WFDB package
MIT-LCP/wfdb-python’s past year of commit activity
Jupyter Notebook 777MIT 312 79 (1 issue needs help) 10 UpdatedFeb 5, 2025
eicu-code Public
Code and website related to the eICU Collaborative Research Database
MIT-LCP/eicu-code’s past year of commit activity
Jupyter Notebook 336MIT 223 98 9 UpdatedDec 19, 2024
license-and-dua Public
The PhysioNet Data Use Agreement and License
MIT-LCP/license-and-dua’s past year of commit activity
7MIT 13 10 1 UpdatedOct 30, 2024
mimic-iv-demo-omop Public Forked fromOHDSI/MIMIC
MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. This repository contains the ETL to the OMOP CDM.
MIT-LCP/mimic-iv-demo-omop’s past year of commit activity
Python 1Apache-2.0 26 0 1 UpdatedOct 29, 2024
aws-physionet-open-data Public
Script for generating the PhysioNet pages in the AWS Open Data Registry
MIT-LCP/aws-physionet-open-data’s past year of commit activity
Python 1MIT0 0 1 UpdatedOct 8, 2024
sccm-datathon Public
Resources for the Society of Critical Care Medicine (SCCM) Datathon
MIT-LCP/sccm-datathon’s past year of commit activity
Jupyter Notebook 23MIT 9 0 2 UpdatedSep 24, 2024