I'm Lukas, a postdoctoral researcher in the lab ofSimon Anders in Heidelberg, Germany. I share Python and R code related to bioinformatics, data science, omics and the occasional fun code project.

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1. scbsscbsPublic

   Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSCAn

   Python 11 7

2. ggpointdensityggpointdensityPublic

   📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

   R 423 27

3. ursgal/ursgalursgal/ursgalPublic

   Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

   Python 41 32

4. MSA_trimmerMSA_trimmerPublic

   Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.

   Python 17 2

5. showTreeshowTreePublic

   showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.

   Python 30 8

6. CAFE_figCAFE_figPublic

   A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

   Python 61 17