Movatterモバイル変換


[0]ホーム

URL:


Skip to content

Navigation Menu

Euro-BioImaging

Search code, repositories, users, issues, pull requests...

Provide feedback

We read every piece of feedback, and take your input very seriously.

Saved searches

Use saved searches to filter your results more quickly

Sign up

Popular repositoriesLoading

  1. BatchConvertBatchConvertPublic

    A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.

    Python 21 4

  2. ome_zarr_pyramidome_zarr_pyramidPublic

    Python 6

  3. OME_Zarr_ToolsOME_Zarr_ToolsPublic

    Course materials for the practical on the Defragmentation Training School 2 - Porto, 8-12 May 2023

    Shell 3

  4. ZarrSegZarrSegPublic

    Command line tool to segment local and remote OME-Zarr data

    Python 2

  5. image_processingimage_processingPublic

    Forked frombugraoezdemir/image_processing

    A repo with several common tools for 3D image processing

    Python 2

  6. Rclone-BIARclone-BIAPublic

    Scripts to facilitate exchange of data between local filesystems and BioImage Archive

    1

Repositories

Loading
Type
Select type
Language
Select language
Sort
Select order
Showing 10 of 19 repositories
  • Euro-BioImaging/FAIR101-Workshop-on-data-deposition-into-BioImage-Archive’s past year of commit activity
    0CC-BY-4.00 0 0 UpdatedMar 17, 2025
  • Euro-BioImaging/ngff_workshop’s past year of commit activity
    HTML0MIT0 0 0 UpdatedMar 17, 2025
  • BatchConvert Public

    A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.

    Euro-BioImaging/BatchConvert’s past year of commit activity
    Python 21MIT 4 15 0 UpdatedMar 14, 2025
  • bfflow Public

    Converts image to OME-TIFF format.

    Euro-BioImaging/bfflow’s past year of commit activity
    Nextflow0MIT 1 0 3 UpdatedDec 6, 2024
  • zarr_parallel_processing Public Forked fromfmi-basel/zarr_parallel_processing

    Scratch repo for the OME-NGFF hackathon

    Euro-BioImaging/zarr_parallel_processing’s past year of commit activity
    Python0GPL-3.0 1 0 0 UpdatedNov 21, 2024
  • Euro-BioImaging/ome_zarr_pyramid’s past year of commit activity
    Python 6MIT0 0 0 UpdatedOct 7, 2024
  • Euro-BioImaging/convert_and_concatenate’s past year of commit activity
    Python00 0 0 UpdatedOct 1, 2024
  • Euro-BioImaging/centriole_tracking_preprocess’s past year of commit activity
    Python00 0 0 UpdatedSep 22, 2024
  • ngff Public Forked fromome/ngff

    Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

    Euro-BioImaging/ngff’s past year of commit activity
    Bikeshed0 45 0 0 UpdatedJan 24, 2024
  • Data Public

    Example data that can be used to test tools.

    Euro-BioImaging/Data’s past year of commit activity
    0CC0-1.00 0 0 UpdatedJan 9, 2024

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…


[8]ページ先頭

©2009-2025 Movatter.jp