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ZNF43

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ZNF43
Identifiers
AliasesZNF43, HTF6, KOX27, ZNF39L1, zinc finger protein 43
External IDsOMIM:603972;MGI:3040691;HomoloGene:128170;GeneCards:ZNF43;OMA:ZNF43 - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for ZNF43
Genomic location for ZNF43
Band19p12Start21,804,946bp[1]
End21,852,125bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for ZNF43
Genomic location for ZNF43
Band13 B3|13 34.54 cMStart67,254,918bp[2]
End67,278,466bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • ganglionic eminence

  • ventricular zone

  • corpus callosum

  • testicle

  • bone marrow cell

  • gonad

  • endometrium

  • epithelium of colon

  • tonsil
Top expressed in
  • Rostral migratory stream

  • lumbar subsegment of spinal cord

  • tail of embryo

  • genital tubercle

  • vestibular membrane of cochlear duct

  • Region I of hippocampus proper

  • ganglionic eminence

  • vas deferens

  • transitional epithelium of urinary bladder

  • embryo
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

7594

238690

Ensembl

ENSG00000198521
ENSG00000279566

ENSMUSG00000055480

UniProt

P17038

Q6P5C7

RefSeq (mRNA)
NM_001256648
NM_001256649
NM_001256650
NM_001256651
NM_001256653

NM_001256654
NM_003423

NM_001001152

RefSeq (protein)
NP_001243577
NP_001243578
NP_001243579
NP_001243580
NP_001243582

NP_001243583
NP_003414
NP_001243577.1
NP_001243578.1
NP_001243579.1

NP_001001152

Location (UCSC)Chr 19: 21.8 – 21.85 MbChr 13: 67.25 – 67.28 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Zinc finger protein 43 is aprotein that in humans is encoded by theZNF43gene.[5][6]

Function

[edit]

This gene belongs to the C2H2-type zinc finger gene family. The zinc finger proteins are involved in gene regulation and development, and are quite conserved throughout evolution. Like this gene product, a third of the zinc finger proteins containing C2H2 fingers also contain the KRAB domain, which has been found to be involved in protein-protein interactions.[6]

See also

[edit]

References

[edit]
  1. ^abcENSG00000279566 GRCh38: Ensembl release 89: ENSG00000198521, ENSG00000279566Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000055480Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Lovering R, Trowsdale J (Jun 1991)."A gene encoding 22 highly related zinc fingers is expressed in lymphoid cell lines".Nucleic Acids Research.19 (11):2921–8.doi:10.1093/nar/19.11.2921.PMC 328252.PMID 1711675.
  6. ^ab"Entrez Gene: ZNF43 zinc finger protein 43".

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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