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Wilson disease protein

From Wikipedia, the free encyclopedia
Mammalian protein found in humans

ATP7B
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2ROP,2EW9,2KOY,2LQB

Identifiers
AliasesATP7B, PWD, WC1, WD, WND, ATPase copper transporting beta
External IDsOMIM:606882;MGI:103297;HomoloGene:20063;GeneCards:ATP7B;OMA:ATP7B - orthologs
Gene location (Human)
Chromosome 13 (human)
Chr.Chromosome 13 (human)[1]
Chromosome 13 (human)
Genomic location for ATP7B
Genomic location for ATP7B
Band13q14.3Start51,930,436bp[1]
End52,012,125bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for ATP7B
Genomic location for ATP7B
Band8 A2|8 10.78 cMStart22,482,801bp[2]
End22,550,321bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • nasal epithelium

  • right testis

  • left testis

  • olfactory zone of nasal mucosa

  • jejunal mucosa

  • right lobe of liver

  • germinal epithelium

  • gonad

  • testicle

  • right hemisphere of cerebellum
Top expressed in
  • yolk sac

  • pharynx

  • gastrula

  • lumbar subsegment of spinal cord

  • urethra

  • right lung

  • right lung lobe

  • submandibular gland

  • left lung lobe

  • respiratory epithelium
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

540

11979

Ensembl

ENSG00000123191

ENSMUSG00000006567

UniProt

P35670

Q64446

RefSeq (mRNA)

NM_000053
NM_001005918
NM_001243182
NM_001330578
NM_001330579

NM_007511

RefSeq (protein)
NP_000044
NP_001005918
NP_001230111
NP_001317507
NP_001317508

NP_000044.2
NP_000044.2
NP_001005918.1
NP_001230111.1

NP_031537
NP_001390638

Location (UCSC)Chr 13: 51.93 – 52.01 MbChr 8: 22.48 – 22.55 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse
Physiological pathway of copper in human body. Cu =copper, CP =ceruloplasmin, ATP7B protein is inHepatocyte.
Simple model of structural feature of ATP7B protein. Cu=Copper binding motif

Wilson disease protein (WND), also known asATP7B protein, is a copper-transportingP-type ATPase which is encoded by theATP7B gene. The ATP7B protein is located in thetrans-Golgi network of the liver and brain and balances the copper level in the body by excreting excess copper into bile and plasma. Genetic disorder of the ATP7B gene may causeWilson's disease, a disease in which copper accumulates in tissues, leading toneurological orpsychiatric issues andliver diseases.

Gene

[edit]

Wilson disease protein is associated withATP7Bgene, approximately 80 Kb, located on humanchromosome 13 and consists of 21 exons. The mRNA transcribed byATP7B gene has a size of 7.5 Kb, and which encodes a protein of 1465amino acids.[5]

The gene is a member of the P-type cation transportATPasefamily and encodes a protein with several membrane-spanning domains, an ATPaseconsensus sequence, a hinge domain, aphosphorylation site, and at least two putativecopper-binding sites. This protein functions as a monomer, exporting copper out of the cells, such as the efflux of hepatic copper into thebile. Alternate transcriptionalsplice variants, encoding different isoforms with distinctcellular localizations, have been characterized.[6] Wilson's disease is caused by variousmutations. One of the common mutations is single base pair mutation, H1069Q.[5]

Structure

[edit]

ATP7B protein is a copper-transportingP-type ATPase, synthesized as a membrane protein of 165 KDa in humanhepatoma cell line,[5] and which is 57%homologous toMenkes disease-associated proteinATP7A.[7]

ATP7B consists of severaldomains:

The CPC motif (Cys-Pro-Cys) in transmembrane segment 6 characterizes the protein as a heavy metal transportingATPase.[8]

Thecopper binding motif also shows a high affinity to other transition metal ions such as zinc Zn(II), cadmium Cd(II), gold Au(III), and mercury Hg(II). However, copper is able to decrease the zinc binding affinity at low concentration and increase copper binding affinity dramatically with increasing concentration to ensure a strong binding between the motif and copper.[8]

As aP-type ATPases, ATP7B undergoes auto-phosphorylation of a key conservedaspartic acid (D) residue in the DKTGT motif. The ATP binding to the protein initiates the reaction and copper binds to the transmembrane region. Then phosphorylation occurs at the aspartic acid residue in the DKTGT motif with Cu release. Thendephosphorylation of the aspartic acid residue recovers the protein to ready for the next transport.[9]

Function

[edit]

Most of ATP7B protein is located in thetrans-Golgi network (TGN) ofhepatocytes, which is different from itshomologous protein ATP7A.[10] Small amount of ATP7B is located in thebrain.[11]

As a copper-transporting protein, one major function is delivering copper to copper dependent enzymes inGolgi apparatus (e.g.ceruloplasmin (CPN)).[10]

In the human body, theliver plays an important role in copper regulation including removal of extra copper.[10] ATP7B participates in the physiological pathway in the copper removal process in two ways: secreting copper intoplasma and excreting copper intobile.[7]

Interactions

[edit]

ATOX1

[edit]

ATP7B receives copper fromcytosolic proteinantioxidant 1 copper chaperone (ATOX1).[5] This protein targets ATP7B directly in liver in order to transport copper.ATOX1 transfers copper from cytosol to the metal binding domain of ATP7B which control the catalytic activity of ATP7B.[12]

Several mutations in ATOX1 can block the copper pathways and causeWilson disease.[12]

GLRX

[edit]

ATP7B interacts withglutaredoxin-1 (GLRX). Subsequent transport is promoted through the reduction of intramoleculardisulfide bonds by GLRX catalysis.[13]

Associations with Wilson's disease

[edit]

Wilson disease happens when accumulation of copper inside the liver causesmitochondrial damage and cell destruction and shows symptoms ofhepatic disease. Then, the loss of excretion of copper in bile leads to an increasing concentration of copper level in urine and causes kidney problems. Therefore, symptoms of Wilson's disease could be various includingkidney disease andneurological disease.[12] The major cause is the malfunction of ATP7B[12] by single base pair mutations, deletions, frame-shifts, splice errors inATP7B gene.[5]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000123191Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000006567Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abcdefghijTerada K, Schilsky ML, Miura N, Sugiyama T (Oct 1998). "ATP7B (WND) protein".The International Journal of Biochemistry & Cell Biology.30 (10):1063–1067.doi:10.1016/S1357-2725(98)00073-9.PMID 9785470.
  6. ^"Entrez Gene: ATP7B ATPase, Cu++ transporting, beta polypeptide".
  7. ^abHarris ED (2000). "Cellular copper transport and metabolism".Annual Review of Nutrition.20:291–310.doi:10.1146/annurev.nutr.20.1.291.PMID 10940336.
  8. ^abBertini I, Gray H, Stiefel E, Valentine J (2006).Biological inorganic chemistry:structure and reactivity. Sausalito, CA: University Science Books.ISBN 978-1-891389-43-6.
  9. ^Banci L, Bertini I, Cantini F, Ciofi-Baffoni S (Aug 2010)."Cellular copper distribution: a mechanistic systems biology approach".Cellular and Molecular Life Sciences.67 (15):2563–2589.doi:10.1007/s00018-010-0330-x.PMC 11115773.PMID 20333435.S2CID 41967295.
  10. ^abcLutsenko S, LeShane ES, Shinde U (Jul 2007)."Biochemical basis of regulation of human copper-transporting ATPases".Archives of Biochemistry and Biophysics.463 (2):134–148.doi:10.1016/j.abb.2007.04.013.PMC 2025638.PMID 17562324.
  11. ^Crisponi G, Nurchi VM, Fanni D, Gerosa C, Nemolato S, Faa G (April 2010). "Copper-related diseases: From chemistry to molecular pathology".Coordination Chemistry Reviews.254 (7–8):876–889.doi:10.1016/j.ccr.2009.12.018.
  12. ^abcdCox DW, Moore SD (Oct 2002). "Copper transporting P-type ATPases and human disease".Journal of Bioenergetics and Biomembranes.34 (5):333–338.doi:10.1023/A:1021293818125.PMID 12539960.S2CID 21471699.
  13. ^Lim CM, Cater MA, Mercer JF, La Fontaine S (Sep 2006)."Copper-dependent interaction of glutaredoxin with the N termini of the copper-ATPases (ATP7A and ATP7B) defective in Menkes and Wilson diseases"(PDF).Biochemical and Biophysical Research Communications.348 (2):428–436.doi:10.1016/j.bbrc.2006.07.067.hdl:10536/DRO/DU:30003772.PMID 16884690. Archived fromthe original(PDF) on 2021-04-22. Retrieved2018-10-31.

Further reading

[edit]

External links

[edit]
PDB gallery
  • 2arf: Solution structure of the Wilson ATPase N-domain in the presence of ATP
    2arf: Solution structure of the Wilson ATPase N-domain in the presence of ATP
  • 2ew9: Solution structure of apoWLN5-6
    2ew9: Solution structure of apoWLN5-6
3.6.1
3.6.2
3.6.3-4:ATPase
3.6.3
Cu++ (3.6.3.4)
Ca+ (3.6.3.8)
Na+/K+ (3.6.3.9)
H+/K+ (3.6.3.10)
OtherP-type ATPase
3.6.4
3.6.5:GTPase
3.6.5.1:Heterotrimeric G protein
3.6.5.2:Small GTPase >Ras superfamily
3.6.5.3:Protein-synthesizing GTPase
3.6.5.5-6:Polymerization motors
F-, V-, and A-type ATPase (3.A.2)
H+ (F-type)
H+ (V-type)
A-ATPase
found in Archea
P-type ATPase (3.A.3)
Transition metal
Iron metabolism
Absorption in
duodenum
Iron(II) oxide:
Iron(III) oxide:
Other
Iron-binding proteins:
Copper metabolism
Zinc metabolism
Electrolyte
Sodium metabolism
Phosphate metabolism
Magnesium metabolism
Calcium metabolism
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