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Vaborbactam

From Wikipedia, the free encyclopedia
Chemical compound

Pharmaceutical compound
Vaborbactam
Clinical data
ATC code
  • None
Identifiers
  • {(3R,6S)-2-Hydroxy-3-[2-(thiophen-2-yl)acetamido]-
    1,2-oxaborinan-6-yl}acetic acid
CAS Number
PubChemCID
DrugBank
ChemSpider
UNII
KEGG
CompTox Dashboard(EPA)
ECHA InfoCard100.235.136Edit this at Wikidata
Chemical and physical data
FormulaC12H16BNO5S
Molar mass297.13 g·mol−1
3D model (JSmol)
  • B1([C@H](CC[C@H](O1)CC(=O)O)NC(=O)CC2=CC=CS2)O
  • InChI=1S/C12H16BNO5S/c15-11(7-9-2-1-5-20-9)14-10-4-3-8(6-12(16)17)19-13(10)18/h1-2,5,8,10,18H,3-4,6-7H2,(H,14,15)(H,16,17)/t8-,10-/m0/s1
  • Key:IOOWNWLVCOUUEX-WPRPVWTQSA-N

Vaborbactam (INN)[1] is a non-β-lactamβ-lactamase inhibitor discovered by Rempex Pharmaceuticals, a subsidiary of The Medicines Company. While not effective as anantibiotic by itself, it restores potency to existing antibiotics by inhibiting the β-lactamase enzymes that would otherwise degrade them. When combined with an appropriate antibiotic it can be used for the treatment ofgram-negative bacterialinfections.[2]

In the United States, thecombination drugmeropenem/vaborbactam (Vabomere) is approved by theFood and Drug Administration for complicatedurinary tract infections andpyelonephritis.[3] The combination was approved for medical use in Canada in December 2024.[4]

Biochemistry

[edit]

Vaborbactam is aboronic acid β-lactamase inhibitor with a high affinity forserine β-lactamases, includingKlebsiella pneumoniae carbapenemase (KPC).[5]Vaborbactam inhibits a variety of β-lactamases, exhibiting a 69 nMKi against the KPC-2 carbapenemase and even lower inhibition constants against CTX-M-15 and SHV-12. Boronic acids are unusual in their ability to reversibly form covalent bonds with alcohols such as theactive site serine in a serine carbapenemase. This property enables them to function astransition state analogs of serine carbapenemase-catalyzed lactam hydrolysis and thereby inhibit these enzymes.[2]

Carbapenemases can be broadly divided into two different categories based on the mechanism they use tohydrolyze thelactam ring in theirsubstrates: Metallo-β-lactamases contain boundzinc ions in their active sites and are therefore inhibited by chelating agents likeEDTA, whileserine carbapenemases feature anactive siteserine that participates in the hydrolysis of the substrate.[6] Serine carbapenemase-catalyzed hydrolysis employs a three-stepmechanism featuringacylation and deacylation steps analogous to the mechanism of protease-catalyzed peptide hydrolysis, proceeding through a tetrahedraltransition state.[6][7]

Given their mechanism of action, the possibility of off-target effects brought about through inhibition of endogenous serine hydrolases is an obvious possible concern in the development of boronic acid β-lactamase inhibitors, and in fact boronic acids likebortezomib have previously been investigated or developed as inhibitors of various human proteases.[2] Vaborbactam, however, is a highly specific β-lactamase inhibitor, with anIC50 >> 1 mM against all human serine hydrolases against which it has been tested.[2] Consistent with its highin vitro specificity, vaborbactam exhibited a good safety profile in human phase I clinical trials, with similar adverse events observed in both placebo and treatment groups.[8] Hecker et al. argue this specificity results from the higher affinity of humanproteases to linear molecules; thus it is expected that aboronheterocycle will have zero effect on them.

References

[edit]
  1. ^World Health Organization (2016). "International nonproprietary names for pharmaceutical substances (INN): recommended INN: list 75".WHO Drug Information.30 (1).hdl:10665/331046.
  2. ^abcdHecker SJ, Reddy KR, Totrov M, Hirst GC, Lomovskaya O, Griffith DC, et al. (May 2015)."Discovery of a Cyclic Boronic Acid β-Lactamase Inhibitor (RPX7009) with Utility vs Class A Serine Carbapenemases".Journal of Medicinal Chemistry.58 (9):3682–92.doi:10.1021/acs.jmedchem.5b00127.PMID 25782055.{{cite journal}}: CS1 maint: overridden setting (link)
  3. ^"FDA approves new antibacterial drug" (Press release). U.S.Food and Drug Administration. 29 August 2017.
  4. ^"Register of Innovative Drugs".Health Canada. 13 January 2025. Retrieved15 January 2025.
  5. ^Burgos RM, Biagi MJ, Rodvold KA, Danziger LH (October 2018). "Pharmacokinetic evaluation of meropenem and vaborbactam for the treatment of urinary tract infection".Expert Opinion on Drug Metabolism & Toxicology.14 (10):1007–1021.doi:10.1080/17425255.2018.1511702.PMID 30106599.S2CID 52006261.
  6. ^abQueenan AM, Bush K (July 2007)."Carbapenemases: the versatile beta-lactamases".Clinical Microbiology Reviews.20 (3):440–58, table of contents.doi:10.1128/CMR.00001-07.PMC 1932750.PMID 17630334.
  7. ^Lamotte-Brasseur J, Knox J, Kelly JA, Charlier P, Fonzé E, Dideberg O, et al. (December 1994)."The structures and catalytic mechanisms of active-site serine beta-lactamases".Biotechnology & Genetic Engineering Reviews.12 (1):189–230.doi:10.1080/02648725.1994.10647912.PMID 7727028.
  8. ^Griffith DC, Loutit JS, Morgan EE, Durso S, Dudley MN (October 2016)."Phase 1 Study of the Safety, Tolerability, and Pharmacokinetics of the β-Lactamase Inhibitor Vaborbactam (RPX7009) in Healthy Adult Subjects".Antimicrobial Agents and Chemotherapy.60 (10):6326–32.doi:10.1128/AAC.00568-16.PMC 5038296.PMID 27527080.
β-lactams
(inhibit synthesis
of peptidoglycan
layer of bacterial
cell wall by binding
to and inhibiting
PBPs, a group of
D-alanyl-D-alanine
transpeptidases
)
Penicillins (Penams)
Narrow
spectrum
β-lactamase sensitive
(1st generation)
β-lactamase resistant
(2nd generation)
Extended
spectrum
Aminopenicillins (3rd generation)
Carboxypenicillins (4th generation)
Ureidopenicillins (4th generation)
Other
Carbapenems /Penems
Cephems
Cephalosporins
Cephamycins
Carbacephems
1st generation
2nd generation
3rd generation
4th generation
5th generation
Siderophore
Veterinary
Monobactams
β-lactamase inhibitors
Combinations
Polypeptides
Lipopeptides
Other
  • Inhibits PG elongation and crosslinking:Ramoplanin§
Intracellular
Other
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