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VSX2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

VSX2
Identifiers
AliasesVSX2, CHX10, HOX10, MCOP2, MCOPCB3, RET1, visual system homeobox 2
External IDsOMIM:142993;MGI:88401;HomoloGene:7266;GeneCards:VSX2;OMA:VSX2 - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for VSX2
Genomic location for VSX2
Band14q24.3Start74,239,449bp[1]
End74,262,738bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for VSX2
Genomic location for VSX2
Band12 D1|12 39.28 cMStart84,616,536bp[2]
End84,642,231bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • gonad

  • lymph node

  • C1 segment

  • nucleus of brain

  • substantia nigra

  • subcutaneous adipose tissue

  • hypothalamus

  • anterior pituitary
Top expressed in
  • neural layer of retina

  • lens

  • ciliary body

  • corneal stroma

  • inner nuclear layer

  • iris

  • lumbar subsegment of spinal cord

  • epithelium of lens

  • gastrula

  • central gray substance of midbrain
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

338917

12677

Ensembl

ENSG00000119614

ENSMUSG00000021239

UniProt

P58304

Q61412

RefSeq (mRNA)

NM_182894

NM_001301427
NM_007701

RefSeq (protein)

NP_878314

NP_001288356
NP_031727

Location (UCSC)Chr 14: 74.24 – 74.26 MbChr 12: 84.62 – 84.64 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Visual system homeobox 2 is aprotein that in humans is encoded by theVSX2gene.[5][6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000119614 –Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000021239 –Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^McAlpine PJ, Shows TB (July 1990). "Nomenclature for human homeobox genes".Genomics.7 (3): 460.doi:10.1016/0888-7543(90)90186-X.PMID 1973146.
  6. ^"Entrez Gene: CHX10 ceh-10 homeodomain containing homolog (C. elegans)".

Further reading

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