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Tissue factor

From Wikipedia, the free encyclopedia
Protein involved in coagulation

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F3
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1AHW,1BOY,1DAN,1FAK,1J9C,1JPS,1O5D,1TFH,1UJ3,1W0Y,1W2K,1WQV,1WSS,1WTG,1WUN,1WV7,1Z6J,2A2Q,2AEI,2AER,2B7D,2B8O,2C4F,2CEF,2CEH,2CEZ,2CFJ,2EC9,2F9B,2FIR,2FLB,2HFT,2PUQ,2ZP0,2ZWL,2ZZU,3ELA,3TH2,3TH3,3TH4,4IBL,4M7L,4Z6A,4ZMA,4YLQ,2FLR

Identifiers
AliasesF3, CD142, TF, TFA, coagulation factor III, tissue factor
External IDsOMIM:134390;MGI:88381;HomoloGene:1511;GeneCards:F3;OMA:F3 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for F3
Genomic location for F3
Band1p21.3Start94,529,173bp[1]
End94,541,759bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for F3
Genomic location for F3
Band3 G1|3 52.94 cMStart121,517,186bp[2]
End121,528,697bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of paranasal sinus

  • palpebral conjunctiva

  • nasal epithelium

  • olfactory zone of nasal mucosa

  • amniotic fluid

  • stromal cell of endometrium

  • left uterine tube

  • lower lobe of lung

  • gallbladder

  • left ovary
Top expressed in
  • Eustachian tube

  • corneal stroma

  • skin of external ear

  • cervix

  • tunica adventitia of aorta

  • respiratory epithelium

  • olfactory epithelium

  • esophagus

  • conjunctival fornix

  • deep cerebellar nuclei
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2152

14066

Ensembl

ENSG00000117525

ENSMUSG00000028128

UniProt

P13726

P20352

RefSeq (mRNA)

NM_001993
NM_001178096

NM_010171

RefSeq (protein)

NP_001171567
NP_001984

NP_034301

Location (UCSC)Chr 1: 94.53 – 94.54 MbChr 3: 121.52 – 121.53 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Tissue factor, also calledplatelet tissue factor or Coagulation factor III,[5] is aprotein present insubendothelial tissue andleukocytes which plays a major role incoagulation and, in humans, is encoded byF3gene. Its role in the blood clotting is the initiation ofthrombin formation from thezymogenprothrombin.Thromboplastin defines the cascade that leads to the activation offactor X—the tissue factor pathway. In doing so, it has replaced the previously named extrinsic pathway in order to eliminate ambiguity.

Function

[edit]

TheF3 gene encodes tissue factor also known as coagulation factor III, which is a cell surfaceglycoprotein. This factor enables cells to initiate the blood coagulation cascades, and it functions as the high-affinity receptor for thecoagulation factor VII. The resulting complex provides a catalytic event that is responsible for initiation of the coagulation protease cascades by specific limited proteolysis. Unlike the other cofactors of these protease cascades, which circulate as nonfunctional precursors, this factor is a potent initiator that is fully functional when expressed on cell surfaces. There are three distinct domains of this factor: extracellular, transmembrane, and cytoplasmic. This protein is the only one in the coagulation pathway for which a congenital deficiency has not been described.[6] In addition to the membrane-bound tissue factor, soluble form of tissue factor was also found which results fromalternatively spliced tissue factor mRNA transcripts, in whichexon 5 is absent and exon 4 is spliced directly to exon 6.[7][8]

Coagulation

[edit]
The coagulation cascade.

Tissue factor (TF) is the cell surface receptor for theserine protease factor VIIa.

The best known function of tissue factor is its role inblood coagulation. The complex of TF withfactor VIIa catalyzes the conversion of the inactive proteasefactor X into the active proteasefactor Xa.

Together with factor VIIa, tissue factor forms the extrinsic pathway of coagulation. This is opposed to the intrinsic (amplification) pathway, which involves both activatedfactor IX andfactor VIII. Both pathways lead to the activation offactor X (the common pathway), which combines with activatedfactor V in the presence of calcium andphospholipid to producethrombin (thromboplastin activity).

Cytokine signaling

[edit]

TF is related to a protein family known as thecytokine receptor class II family. The members of this receptor family are activated bycytokines. Cytokines are small proteins that can influence the behavior ofwhite blood cells. Binding of VIIa to TF has also been found to start signaling processes inside the cell. The signaling function of TF/VIIa plays a role inangiogenesis andapoptosis. Pro-inflammatory and pro-angiogenic responses are activated by TF/VIIa-mediated cleavage by the protease-activated receptor 2 (PAR2).[9] EphB2 and EphA2 of the Eph tyrosine kinase receptor (RTK) family can also be cleaved by TF/VIIa.[10]

Structure

[edit]

Tissue factor belongs to thecytokine receptorprotein superfamily and consists of threedomains:[11]

  1. an extracellular domain, which consists of twofibronectin type III modules whose hydrophobic cores merge in the domain-domain interface. This serves as a (probably rigid) template forfactor VIIa binding.
  2. atransmembrane domain.
  3. a cytosolic domain of 21 amino acids length inside the cell which is involved in the signaling function of TF.

Note that one of factor VIIa's domains,GLA domain, binds in the presence of calcium to negatively chargedphospholipids, and this binding greatly enhances factor VIIa binding to tissue factor.

Tissue distribution

[edit]

Some cells release TF in response to blood vessel damage (see next paragraph) and some do only in response to inflammatory mediators (endothelial cells/macrophages).

TF is expressed by cells which are normally not exposed to flowing blood, such as sub-endothelial cells (e.g.smooth muscle cells) and cells surrounding blood vessels (e.g.fibroblasts). This can change when the blood vessel is damaged by, for example, physical injury or rupture ofatherosclerotic plaques. Exposure of TF-expressing cells during injury allows the complex formation of TF with factor VII. Factor VII and TF form an equimolar complex in the presence of calcium ions, leading to the activation of factor VII on a membrane surface.

The inner surface of the blood vessel consists of endothelial cells. Endothelial cells do not express TF except when they are exposed to inflammatory molecules such astumor necrosis factor-alpha (TNF-alpha). Another cell type that expresses TF on the cell surface in inflammatory conditions is themonocyte (a white blood cell).

Thromboplastin

[edit]

Historically,thromboplastin was a lab reagent, usually derived from placental sources, used to assayprothrombin times (PT time). Thromboplastin, by itself, could activate the extrinsic coagulation pathway. When manipulated in the laboratory, a derivative could be created called partial thromboplastin, which was used to measure the intrinsic pathway. This test is called theaPTT, or activated partial thromboplastin time. It was not until much later that the subcomponents of thromboplastin and partial thromboplastin were identified. Thromboplastin contains phospholipids as well as tissue factor, both of which are needed in the activation of the extrinsic pathway, whereas partial thromboplastin does not contain tissue factor. Tissue factor is not needed to activate the intrinsic pathway.

Interactions

[edit]

Tissue factor has been shown tointeract withFactor VII.[12][13]

Additional images

[edit]
  • Tissue factor
    Tissue factor
  • Blood plasma after the addition of tissue factor
    Blood plasma after the addition of tissue factor

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000117525Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000028128Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Zhou RF, Liu Y, Wang YX, Mo W, Yu M (October 2011). "Coagulation factor III (tissue factor) is required for vascularization in zebrafish embryos".Genetics and Molecular Research.10 (4):4147–4157.doi:10.4238/2011.October.31.2 (inactive 21 October 2025).PMID 22057990.{{cite journal}}: CS1 maint: DOI inactive as of October 2025 (link)
  6. ^"Entrez Gene: F3 coagulation factor III (thromboplastin, tissue factor)".
  7. ^Guo W, Wang H, Zhao W, Zhu J, Ju B, Wang X (January 2001). "Effect of all-trans retinoic acid and arsenic trioxide on tissue factor expression in acute promyelocytic leukemia cells".Chinese Medical Journal.114 (1):30–34.PMID 11779431.
  8. ^Bogdanov VY, Balasubramanian V, Hathcock J, Vele O, Lieb M, Nemerson Y (April 2003). "Alternatively spliced human tissue factor: a circulating, soluble, thrombogenic protein".Nature Medicine.9 (4):458–462.doi:10.1038/nm841.PMID 12652293.S2CID 13173744.
  9. ^Ruf W, Disse J, Carneiro-Lobo TC, Yokota N, Schaffner F (July 2011)."Tissue factor and cell signalling in cancer progression and thrombosis".Journal of Thrombosis and Haemostasis.9 (Suppl 1):306–315.doi:10.1111/j.1538-7836.2011.04318.x.PMC 3151023.PMID 21781267.
  10. ^Eriksson O, Ramström M, Hörnaeus K, Bergquist J, Mokhtari D, Siegbahn A (November 2014)."The Eph tyrosine kinase receptors EphB2 and EphA2 are novel proteolytic substrates of tissue factor/coagulation factor VIIa".The Journal of Biological Chemistry.289 (47):32379–32391.doi:10.1074/jbc.M114.599332.PMC 4239594.PMID 25281742.
  11. ^Muller YA, Ultsch MH, de Vos AM (February 1996). "The crystal structure of the extracellular domain of human tissue factor refined to 1.7 A resolution".Journal of Molecular Biology.256 (1):144–159.doi:10.1006/jmbi.1996.0073.PMID 8609606.
  12. ^Carlsson K, Freskgård PO, Persson E, Carlsson U, Svensson M (June 2003)."Probing the interface between factor Xa and tissue factor in the quaternary complex tissue factor-factor VIIa-factor Xa-tissue factor pathway inhibitor".European Journal of Biochemistry.270 (12):2576–2582.doi:10.1046/j.1432-1033.2003.03625.x.PMID 12787023.
  13. ^Zhang E, St Charles R, Tulinsky A (February 1999). "Structure of extracellular tissue factor complexed with factor VIIa inhibited with a BPTI mutant".Journal of Molecular Biology.285 (5):2089–2104.doi:10.1006/jmbi.1998.2452.PMID 9925787.

Further reading

[edit]

External links

[edit]
PDB gallery
  • 1ahw: A COMPLEX OF EXTRACELLULAR DOMAIN OF TISSUE FACTOR WITH AN INHIBITORY FAB (5G9)
    1ahw: A COMPLEX OF EXTRACELLULAR DOMAIN OF TISSUE FACTOR WITH AN INHIBITORY FAB (5G9)
  • 1boy: EXTRACELLULAR REGION OF HUMAN TISSUE FACTOR
    1boy: EXTRACELLULAR REGION OF HUMAN TISSUE FACTOR
  • 1dan: COMPLEX OF ACTIVE SITE INHIBITED HUMAN BLOOD COAGULATION FACTOR VIIA WITH HUMAN RECOMBINANT SOLUBLE TISSUE FACTOR
    1dan: COMPLEX OF ACTIVE SITE INHIBITED HUMAN BLOOD COAGULATION FACTOR VIIA WITH HUMAN RECOMBINANT SOLUBLE TISSUE FACTOR
  • 1fak: HUMAN TISSUE FACTOR COMPLEXED WITH COAGULATION FACTOR VIIA INHIBITED WITH A BPTI-MUTANT
    1fak: HUMAN TISSUE FACTOR COMPLEXED WITH COAGULATION FACTOR VIIA INHIBITED WITH A BPTI-MUTANT
  • 1j9c: Crystal Structure of tissue factor-factor VIIa complex
    1j9c: Crystal Structure of tissue factor-factor VIIa complex
  • 1jps: Crystal structure of tissue factor in complex with humanized Fab D3h44
    1jps: Crystal structure of tissue factor in complex with humanized Fab D3h44
  • 1o5d: Dissecting and Designing Inhibitor Selectivity Determinants at the S1 site Using an Artificial Ala190 Protease (Ala190 uPA)
    1o5d: Dissecting and Designing Inhibitor Selectivity Determinants at the S1 site Using an Artificial Ala190 Protease (Ala190 uPA)
  • 1tfh: EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR
    1tfh: EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR
  • 1uj3: Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor
    1uj3: Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor
  • 1w0y: TF7A_3771 COMPLEX
    1w0y: TF7A_3771 COMPLEX
  • 1w2k: TF7A_4380 COMPLEX
    1w2k: TF7A_4380 COMPLEX
  • 1wqv: Human Factor Viia-Tissue Factor Complexed with propylsulfonamide-D-Thr-Met-p-aminobenzamidine
    1wqv: Human Factor Viia-Tissue Factor Complexed with propylsulfonamide-D-Thr-Met-p-aminobenzamidine
  • 1wss: Human Factor Viia-Tissue Factor in Complex with peprid mimetic inhibitor that has two charge groups in P2 and P4
    1wss: Human Factor Viia-Tissue Factor in Complex with peprid mimetic inhibitor that has two charge groups in P2 and P4
  • 1wtg: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-biphenylalanine-Gln-p-aminobenzamidine
    1wtg: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-biphenylalanine-Gln-p-aminobenzamidine
  • 1wun: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-Trp-Gln-p-aminobenzamidine
    1wun: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-Trp-Gln-p-aminobenzamidine
  • 1wv7: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-5-propoxy-Trp-Gln-p-aminobenzamidine
    1wv7: Human Factor Viia-Tissue Factor Complexed with ethylsulfonamide-D-5-propoxy-Trp-Gln-p-aminobenzamidine
  • 1z6j: Crystal Structure of a ternary complex of Factor VIIa/Tissue Factor/Pyrazinone Inhibitor
    1z6j: Crystal Structure of a ternary complex of Factor VIIa/Tissue Factor/Pyrazinone Inhibitor
  • 2a2q: Complex of Active-site Inhibited Human Coagulation Factor VIIa with Human Soluble Tissue Factor in the Presence of Ca2+, Mg2+, Na+, and Zn2+
    2a2q: Complex of Active-site Inhibited Human Coagulation Factor VIIa with Human Soluble Tissue Factor in the Presence of Ca2+, Mg2+, Na+, and Zn2+
  • 2aei: Crystal structure of a ternary complex of factor VIIa/tissue factor and 2-[[6-[3-(aminoiminomethyl)phenoxy]-3,5-difluro-4-[(1-methyl-3-phenylpropyl)amino]-2-pyridinyl]oxy]-benzoic acid
    2aei: Crystal structure of a ternary complex of factor VIIa/tissue factor and 2-[[6-[3-(aminoiminomethyl)phenoxy]-3,5-difluro-4-[(1-methyl-3-phenylpropyl)amino]-2-pyridinyl]oxy]-benzoic acid
  • 2aer: Crystal Structure of Benzamidine-Factor VIIa/Soluble Tissue Factor complex.
    2aer: Crystal Structure of Benzamidine-Factor VIIa/Soluble Tissue Factor complex.
  • 2b7d: Factor VIIa Inhibitors: Chemical Optimization, Preclinical Pharmacokinetics, Pharmacodynamics, and Efficacy in a Baboon Thrombosis Model
    2b7d: Factor VIIa Inhibitors: Chemical Optimization, Preclinical Pharmacokinetics, Pharmacodynamics, and Efficacy in a Baboon Thrombosis Model
  • 2b8o: Crystal Structure of Glu-Gly-Arg-Chloromethyl Ketone-Factor VIIa/Soluble Tissue Factor Complex
    2b8o: Crystal Structure of Glu-Gly-Arg-Chloromethyl Ketone-Factor VIIa/Soluble Tissue Factor Complex
  • 2c4f: CRYSTAL STRUCTURE OF FACTOR VII.STF COMPLEXED WITH PD0297121
    2c4f: CRYSTAL STRUCTURE OF FACTOR VII.STF COMPLEXED WITH PD0297121
  • 2f9b: Discovery of Novel Heterocyclic Factor VIIa Inhibitors
    2f9b: Discovery of Novel Heterocyclic Factor VIIa Inhibitors
  • 2fir: Crystal structure of DFPR-VIIa/sTF
    2fir: Crystal structure of DFPR-VIIa/sTF
  • 2flb: Discovery of a Novel Hydroxy Pyrazole Based Factor IXa Inhibitor
    2flb: Discovery of a Novel Hydroxy Pyrazole Based Factor IXa Inhibitor
  • 2flr: Novel 5-Azaindole Factor VIIa Inhibitors
    2flr: Novel 5-Azaindole Factor VIIa Inhibitors
  • 2hft: THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION
    2hft: THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION
  • 2puq: Crystal structure of active site inhibited coagulation factor VIIA in complex with soluble tissue factor
    2puq: Crystal structure of active site inhibited coagulation factor VIIA in complex with soluble tissue factor
Coagulation factors
Primary hemostasis
(platelet activation)
Intrinsic pathway
(contact activation)
Extrinsic pathway
(tissue factor)
Common pathway
Anticoagulant factors
Fibrinolytic factors
Coagulation markers
Platelet activation
Thrombin generation
Fibrin generation
Fibrinolysis
1–50
51–100
101–150
151–200
201–250
251–300
301–350
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